From 4d6641fb9ff991b1c8b452b89a5ec9a8b7fb1d17 Mon Sep 17 00:00:00 2001
From: ticlla <monicaroxana.ticllaccenhua@unibas.ch>
Date: Thu, 7 Nov 2019 13:39:16 -0500
Subject: [PATCH] include variable to set where MetaSnk will download
 reference/needed files

---
 config.yaml | 2 ++
 1 file changed, 2 insertions(+)

diff --git a/config.yaml b/config.yaml
index ca6405e..1f62c39 100644
--- a/config.yaml
+++ b/config.yaml
@@ -11,6 +11,8 @@
 #   
 # PATH to config file for SnakeMake
 # configfile_path: ''
+# PATH to MetaSnk_db where MetaSnk will download reference databases
+METASNKDB_DIR: '$HOME/MetaSnk_db'
 # Absolute PATH to folder where to find fastq files
 RAW_DIR: '/home/mticlla/Documents/Git_repositories/metagenomicsnake_testdata/data/raw'
 # Absolute PATH to folder where to place output files
-- 
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