diff --git a/assembly/workflow/Snakefile b/assembly/workflow/Snakefile
index d47aae17958fe3368d27171f4e3d5d969858e714..8dbb2482198a0f109f40862b950d99b35605dc65 100755
--- a/assembly/workflow/Snakefile
+++ b/assembly/workflow/Snakefile
@@ -1,8 +1,7 @@
-
-containerized: "container/assemblySC.sif"
-
 include: "rules/common.smk"
 
+containerized: config["container"]
+
 include: "rules/readQC.smk"
 
 include: "rules/assemble.smk"