diff --git a/assembly/config/config.yaml b/assembly/config/config.yaml
index e3405c4772dbb36610b12b025c7e79d4038a9d36..171ee8f746989a4e8f72d3b20b4e37709e23748f 100755
--- a/assembly/config/config.yaml
+++ b/assembly/config/config.yaml
@@ -11,6 +11,7 @@ ref:
   gbf: resources/H37Rv.gbf
 
 bakta_db: resources/bakta_db
+container: container/assemblySC.sif
 
 threads_per_job: 4