Explore projects
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zavolan_group / tools / zarp-cli
Apache License 2.0User-friendly command-line interface for the ZARP RNA-Seq analysis pipeline
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zavolan_group / pipelines / ZARP
Apache License 2.0General purpose Snakemake RNA-seq analysis workflow
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TBRU / Treemmer
GNU General Public License v3.0 or laterPython tool to reduce size and redundancy of phylogenetic datasets
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zavolan_group / tools / Transcript sampler
MIT LicenseUpdated -
Nan Wang / thera
GNU Affero General Public License v3.0Updated -
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TBRU / TBDARbiome cases
BSD 3-Clause "New" or "Revised" LicenseA public repository of the study "The sputum microbiome in pulmonary tuberculosis and its association with disease manifestations: a cross-sectional study within a prospective human cohort in Tanzania (TB-DAR)".
Associated publication: https://doi.org/10.3389/fmicb.2021.633396
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TBRU / TACOS
Apache License 2.0TACOS is a diverse Set Of Commands And Tools (SOCAT, but TACOS sounds much better!).
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Jean-Guillaume Piccinali / SPH-EXA_mini-app
MIT LicenseUpdated -
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zavolan_group / pipelines / scRNA-seq-simulation
MIT LicenseThe projects implements a simulation of single cell RNA sequencing (scRNA-seq), accounting for some common sources noise that complicate the analysis of the resulting data.
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