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Protein language model embedding based alignment (EBA) method
Generates an ASCII-style pileup of read alignments in one or more BAM files against one or more regions specified in a BED file
Tools/ code/ Dockerfiles... used to convert user projects into ModelCIF for upload to ModelArchive. Grown over time/ with every project.
Tools to import models of the Wilkins group (Tara) to ModelArchive