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Updated date
hot fix integration test script
zarp!21
· created
Feb 14, 2020
by
Alex Kanitz
master
Merged
0
updated
Feb 14, 2020
repo follows recommended structure
zarp!22
· created
Feb 14, 2020
by
Alex Kanitz
master
Merged
0
updated
Feb 14, 2020
get Snakemake input from LabKey API
zarp!23
· created
Feb 14, 2020
by
BIOPZ-Katsantoni Maria
master
Merged
0
updated
Feb 15, 2020
TIN score calculation added
zarp!25
· created
Feb 17, 2020
by
BIOPZ-Bak Maciej
master
Merged
0
updated
Feb 17, 2020
run tests in verbose mode
zarp!26
· created
Feb 18, 2020
by
Alex Kanitz
master
Merged
0
updated
Feb 18, 2020
install dependencies via Conda
zarp!24
· created
Feb 16, 2020
by
Alex Kanitz
master
Merged
8
updated
Feb 18, 2020
fix broken links in docs
zarp!27
· created
Feb 18, 2020
by
Alex Kanitz
master
Merged
0
updated
Feb 18, 2020
create log directories in Snakefile
zarp!28
· created
Feb 20, 2020
by
Alex Kanitz
master
Merged
0
updated
Feb 20, 2020
Handle polyA processing in input preparation script
zarp!31
· created
Feb 21, 2020
by
BIOPZ-Katsantoni Maria
master
Merged
0
updated
Feb 21, 2020
Rule to collect all TPM values from Salmon added
zarp!30
· created
Feb 21, 2020
by
BIOPZ-Iborra de Toledo Paula
master
Merged
0
updated
Feb 21, 2020
Use minified docker images
zarp!32
· created
Feb 21, 2020
by
Alex Kanitz
master
Merged
0
updated
Feb 21, 2020
Generate gene and transcript count tables from salmon
zarp!33
· created
Feb 24, 2020
by
BIOPZ-Gypas Foivos
master
Merged
0
updated
Feb 24, 2020
Restructure pipeline
zarp!34
· created
Mar 06, 2020
by
BIOPZ-Katsantoni Maria
v0.1.0 release
master
Merged
1
updated
Mar 06, 2020
Transcriptome from genome and gene annotations
zarp!36
· created
Mar 06, 2020
by
BIOPZ-Iborra de Toledo Paula
master
Merged
1
updated
Mar 06, 2020
Replace cufflinks image with gffread image
zarp!37
· created
Mar 06, 2020
by
BIOPZ-Gypas Foivos
v0.1.0 release
master
Testing & CI/CD
Merged
0
updated
Mar 06, 2020
Normalised coverage
zarp!35
· created
Mar 06, 2020
by
Dominik Burri
master
Merged
6
updated
Mar 07, 2020
Simplify star_rpm & index_genomic_alignment_samtools.
zarp!38
· created
Mar 06, 2020
by
BIOPZ-Gypas Foivos
v0.1.0 release
master
Doing
Merged
1
updated
Mar 07, 2020
Alfa integration
zarp!41
· created
Mar 12, 2020
by
Dominik Burri
v0.1.0 release
master
Merged
6
updated
Mar 12, 2020
add TIN score merge and plot steps
zarp!43
· created
Mar 12, 2020
by
BIOPZ-Bak Maciej
master
Merged
2
updated
Mar 12, 2020
added ALFA documentation
zarp!42
· created
Mar 12, 2020
by
Dominik Burri
documentation
Merged
2
updated
Mar 13, 2020
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