From bea51dbeb5368ed732336c064eda51426cdd2d1e Mon Sep 17 00:00:00 2001 From: Kai Schleicher <kai.schleicher@unibas.ch> Date: Thu, 15 Dec 2022 08:37:40 +0000 Subject: [PATCH] Update README.md --- README.md | 3 +++ 1 file changed, 3 insertions(+) diff --git a/README.md b/README.md index 9f9759b..9f578c4 100644 --- a/README.md +++ b/README.md @@ -3,6 +3,9 @@ - helper scripts used in the IMCF workflow to register and analyse 3D volumes of mouse brain. - the workflow is documented on the Biozentrums internal wiki space: https://wiki.biozentrum.unibas.ch/x/xEBwEw +## median.ijm +- IJ-macro. Applies a 15px median filter to an image and saves the resulting image + ## remap_labelimage.py - Fiji macro to workaround a bug in Imaris measurement - re-maps the reference atlas label image -- GitLab