From 1138b3a5fe1df59e09ac6736562544f2905e3dae Mon Sep 17 00:00:00 2001
From: "kai.schleicher@unibas.ch" <kai.schleicher@unibas.ch>
Date: Fri, 6 Nov 2020 09:15:47 +0100
Subject: [PATCH] fix: fixed typo in folder naming
---
2b_central_nuclei_counter.py | 2 +-
2c_fibertyping.py | 2 +-
2 files changed, 2 insertions(+), 2 deletions(-)
diff --git a/2b_central_nuclei_counter.py b/2b_central_nuclei_counter.py
index a18bdb2..29477e7 100644
--- a/2b_central_nuclei_counter.py
+++ b/2b_central_nuclei_counter.py
@@ -373,7 +373,7 @@ raw_image_title = fix_BF_czi_imagetitle(raw)
# take care of paths and directories
input_rois_path = fix_ij_dirs( roi_zip )
-output_dir = fix_ij_dirs(output_dir) + "/2a_central_nuclei_counter/"
+output_dir = fix_ij_dirs(output_dir) + "/2b_central_nuclei_counter/"
if not os.path.exists( output_dir ):
os.makedirs( output_dir )
diff --git a/2c_fibertyping.py b/2c_fibertyping.py
index 91f82db..5a4288d 100644
--- a/2c_fibertyping.py
+++ b/2c_fibertyping.py
@@ -378,7 +378,7 @@ raw_image_title = fix_BF_czi_imagetitle(raw)
# output_dir = fix_ij_dirs(output_dir)
input_rois_path = fix_ij_dirs( roi_zip )
-output_dir = fix_ij_dirs(output_dir) + "/2b_fibertyping/"
+output_dir = fix_ij_dirs(output_dir) + "/2c_fibertyping/"
if not os.path.exists( output_dir ):
os.makedirs( output_dir )
--
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