From 1725ac7ff988c22b15dea5587afc6c222f76a795 Mon Sep 17 00:00:00 2001
From: schlda00 <kai.schleicher@unibas.ch>
Date: Wed, 16 Apr 2025 13:37:31 +0200
Subject: [PATCH] Remove unused line
---
2d_spots_in_fibers.py | 1 -
1 file changed, 1 deletion(-)
diff --git a/2d_spots_in_fibers.py b/2d_spots_in_fibers.py
index acf308f..34332f1 100644
--- a/2d_spots_in_fibers.py
+++ b/2d_spots_in_fibers.py
@@ -456,7 +456,6 @@ for index, channel in enumerate(processing_channels):
quality_threshold = float(quality_thresholds[index])
spots_channel = BFopen_image(path_to_image, channel, series_number)
spots_label_imp = run_trackmate_dog_spot_detector(spots_channel, spot_diameter, quality_threshold)
- # save_image_as_IJtif(spots_label_imp, filename, "spots_ch" + str(channel), parent_dir)
save_labelimage_as_ijroiset(spots_label_imp, filename, "spots_ch" + str(channel), parent_dir)
spots_binary_imp = convert_labelimage_to_binary(spots_label_imp)
dapi_positive_spots_binary = ImageCalculator.run(spots_binary_imp, dapi_binary, "Multiply create")
--
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