From 387af8a7803ad8b066aa10a940f69aaa02c8a436 Mon Sep 17 00:00:00 2001
From: Laurent Guerard <laurent.guerard@unibas.ch>
Date: Tue, 14 Jan 2025 11:23:45 +0100
Subject: [PATCH] Correct typo and clarify python environment

---
 README.md | 7 ++++---
 1 file changed, 4 insertions(+), 3 deletions(-)

diff --git a/README.md b/README.md
index 5b106e1..850f04b 100644
--- a/README.md
+++ b/README.md
@@ -11,9 +11,10 @@ Original code: <https://github.com/Hyojung-Choo/Myosoft/tree/Myosoft-hub>
 
 ## [`1_identify_fibers.py`](1_identify_fibers.py)
 
-- Will identify all fibers based on the membrane staining using [Cellpose](https://github.com/MouseLand/cellpose) segmentation, filter them according to the morphometric gates and save the
-  corresponding ROIs.
-  - Need to be installed ont the machine where the script is run. Follow [this guide](https://wiki.biozentrum.unibas.ch/display/IMCF/Cellpose+python+environment) to create the environment.
+- Will identify all fibers based on the membrane staining using [Cellpose](https://github.com/MouseLand/cellpose) 
+  segmentation, filter them according to the morphometric gates and save the corresponding ROIs.
+  - Need to be installed on the machine where the script is run. Follow 
+    [this guide](https://wiki.biozentrum.unibas.ch/display/IMCF/Cellpose+python+environment) to create the environment. Please don't recreate the environment if it already exists!
 - Will now also save the Cellpose segmentation as a binary so it can be edited
   manually. If you do so, you need to run the "extended particle analyzer"
   manually as well to choose & apply the morphometric gates.
-- 
GitLab