From 811cdd7425ba30df15c2bba0efb331f293900063 Mon Sep 17 00:00:00 2001 From: schlda00 <kai.schleicher@unibas.ch> Date: Mon, 14 Apr 2025 17:32:51 +0200 Subject: [PATCH] Precises comment --- 2d_spots_in_fibers.py | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/2d_spots_in_fibers.py b/2d_spots_in_fibers.py index ae047bd..f16d7c7 100644 --- a/2d_spots_in_fibers.py +++ b/2d_spots_in_fibers.py @@ -757,10 +757,10 @@ processing_channels = processing_channels_string.split(",") quality_thresholds_string = quality_thresholds_string.replace(" ", "") quality_thresholds = quality_thresholds_string.split(",") -# Get the fiber segmentation and convert to labelimage +# Get the fiber segmentation from ij roizip and convert to labelimage canvas = create_empty_image(32, image_width, image_height) load_rois_from_zip(fiber_segmentation_roiset) -fiber_label_imp = convert_rois_to_labelimage(canvas) +fibers_label_imp = convert_rois_to_labelimage(canvas) canvas.close() # threshold DAPI channel and convert to binary -- GitLab