From f199674780b747ed6d41a4375df07059b4ae3c7e Mon Sep 17 00:00:00 2001
From: Laurent Guerard <laurent.guerard@unibas.ch>
Date: Tue, 29 Apr 2025 14:55:42 +0200
Subject: [PATCH] Switch to python module approach
---
2c_fibertyping.py | 8 ++++++--
1 file changed, 6 insertions(+), 2 deletions(-)
diff --git a/2c_fibertyping.py b/2c_fibertyping.py
index 8b68e71..7497a4c 100644
--- a/2c_fibertyping.py
+++ b/2c_fibertyping.py
@@ -131,13 +131,17 @@ def measure_mean_of_rois(imp, channel, rm):
return mean_intensities
+# ─── Main Code ────────────────────────────────────────────────────────────────
-execution_start_time = time.time()
+if __name__ == "__main__":
+ execution_start_time = time.time()
+ IJ.log("\\Clear")
misc.timed_log("Script starting")
setup_defined_ij(rm, rt)
image_file_info = pathtools.parse_path(path_to_image)
-# open image using Bio-Formats
+
+ # open image using Bio-Formats
raw = bf.import_image(image_file_info["full"])
raw.hide()
--
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