From 586d878a7c53e3198d379e39fe0bb9061dc4b1f0 Mon Sep 17 00:00:00 2001
From: Niko Ehrenfeuchter <nikolaus.ehrenfeuchter@unibas.ch>
Date: Tue, 27 Mar 2018 16:48:16 +0200
Subject: [PATCH] Add option to save the log file
---
.../scripts/Plugins/NoiSee/NoiSee_Fluorescein_Analysis.ijm | 6 ++++++
1 file changed, 6 insertions(+)
diff --git a/src/main/resources/scripts/Plugins/NoiSee/NoiSee_Fluorescein_Analysis.ijm b/src/main/resources/scripts/Plugins/NoiSee/NoiSee_Fluorescein_Analysis.ijm
index 644a22d..a7ba4b2 100644
--- a/src/main/resources/scripts/Plugins/NoiSee/NoiSee_Fluorescein_Analysis.ijm
+++ b/src/main/resources/scripts/Plugins/NoiSee/NoiSee_Fluorescein_Analysis.ijm
@@ -3,6 +3,7 @@
// @File(label="Fluorescein image",description="fluorescein image") fluoimage
// @Boolean(label="Save results as PDF",description="generate a PDF with images and plots",value="true") save_pdf
// @Integer(label="Log level",description="higher number means more messages",min=0,max=2,style="scroll bar") LOGLEVEL
+// @Boolean(label="Save log messages",description="save contents of the 'Log' window in a text file",value="false") save_log
//////////// NoiSee Fluorescein Analysis ///////////////////////////////////////////////////////
@@ -269,6 +270,11 @@ function process_fluo() {
////////// arrange the windows and create a PDF of images and plots ////////// //////////
rgb_sig = duplicateAndClose(rgb_sig);
rgb_hist = duplicateAndClose(rgb_hist);
+ if (save_log) {
+ selectWindow("Log");
+ saveAs("Text", respath + "/Log.txt");
+ }
+
setBatchMode("exit and display"); // exit batch mode and show images
// wait(100); // give the OS some time to display all image windows
--
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