diff --git a/src/imcflibs/imagej/shading.py b/src/imcflibs/imagej/shading.py index 6f71332644b2ee55a4b40ebbdfbcf97ef19baa51..6eda7958ceb4d3babf98519e5a8dee98c12eb80a 100644 --- a/src/imcflibs/imagej/shading.py +++ b/src/imcflibs/imagej/shading.py @@ -38,14 +38,16 @@ def apply_model(imps, model, merge=True): The merged ImagePlus with all channels, or the original list of stacks with the shading-corrected image planes. """ + log.debug("Applying shading correction...") calc = ij.plugin.ImageCalculator() - for stack in imps: - # log.debug("Processing channel...") + for i, stack in enumerate(imps): + log.debug("Processing channel %i...", i) calc.run("Divide stack", stack, model) if not merge: return imps + log.debug("Merging shading-corrected channels...") merger = ij.plugin.RGBStackMerge() merged_imp = merger.mergeChannels(imps, False) return merged_imp