From 2ab55b5f610cc0b8b55186b960c1ec9f0c461262 Mon Sep 17 00:00:00 2001 From: Tauriello Gerardo <gerardo.tauriello@unibas.ch> Date: Fri, 26 Mar 2021 10:13:52 +0000 Subject: [PATCH] Remove specific path to SMTL Path should be entered by whoever uses the script with an appropriate path to the SMTL. --- extras/data_generation/structure_db/get_data_from_smtl.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/extras/data_generation/structure_db/get_data_from_smtl.py b/extras/data_generation/structure_db/get_data_from_smtl.py index 59140bbd..83785b78 100644 --- a/extras/data_generation/structure_db/get_data_from_smtl.py +++ b/extras/data_generation/structure_db/get_data_from_smtl.py @@ -32,7 +32,7 @@ from sm import smtl # the hh-suite available at: https://github.com/soedinglab/hh-suite. pisces_path = "cullpdb_pc20_res2.0_R0.25_d180524_chains6670" -smtl_path = "/scicore/data/databases/SMTL/" +smtl_path = "PATH_TO_SMTL" # TO BE SET profile_out_dir = "hmms" structure_out_dir = "structures" -- GitLab