diff --git a/extras/external_scripts/CAMEO_bst/README b/extras/external_scripts/CAMEO_bst/README index e6547cf9358638fe399c8e23820693f92f08770a..3c4b2a141f081e83f4592aa62d584d01fc53cae7 100644 --- a/extras/external_scripts/CAMEO_bst/README +++ b/extras/external_scripts/CAMEO_bst/README @@ -15,9 +15,8 @@ pm CAMEO_bst.py test_tpl.pdb test_aln.fasta run with precalculated sequence profile: pm CAMEO_bst.py test_tpl.pdb test_aln.fasta -p test_profile.hhm -run with profile calculation (HHblits setup specific to the sciCORE compute -environment at the university of Basel): -pm CAMEO_bst.py test_tpl.pdb test_aln.fasta -r $EBROOTHHMINSUITE -n /scicore/data/databases/hhtools/nr20_12Aug11 +run with profile calculation: +pm CAMEO_bst.py test_tpl.pdb test_aln.fasta -r <PATH_TO_HHBLITS_INSTALLATION> -n <PATH_TO_NR_DATABASE> [1] Haas et al., (2019) (submitted) [2] Y. Zhang and J. Skolnick, TM-align: A protein structure alignment algorithm