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diff --git a/doc/html/.doctrees/meld/rawmodel.doctree b/doc/html/.doctrees/meld/rawmodel.doctree
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diff --git a/doc/html/.doctrees/users.doctree b/doc/html/.doctrees/users.doctree
index ac4d870c25b776223eafcbe016fe9a8312cd05a8..f7ce8119c9596087cf9d1a9246dd1d3353cde392 100644
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diff --git a/doc/html/_modules/index.html b/doc/html/_modules/index.html
index e9d171da247be33dbecd890d76f39bac6e5a66c0..8882e5649dafa9edac6d4259aa83eff9aa7fdfed 100644
--- a/doc/html/_modules/index.html
+++ b/doc/html/_modules/index.html
@@ -85,7 +85,7 @@
</div>
<div class="footer">
© Copyright 2013, Bienchen.
- Last updated on Jun 14 19:22, 2014.
+ Last updated on Jun 19 11:36, 2014.
Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.2b1.
</div>
</body>
diff --git a/doc/html/_modules/promod3/core/argcheck.html b/doc/html/_modules/promod3/core/argcheck.html
index c1a3e1a187759bec0707d795f6f6737ad338ab0a..fe054b653e24248041c3b214520c47dcc9be43b2 100644
--- a/doc/html/_modules/promod3/core/argcheck.html
+++ b/doc/html/_modules/promod3/core/argcheck.html
@@ -174,7 +174,7 @@
</div>
<div class="footer">
© Copyright 2013, Bienchen.
- Last updated on Jun 14 19:22, 2014.
+ Last updated on Jun 19 11:36, 2014.
Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.2b1.
</div>
</body>
diff --git a/doc/html/_sources/contributing.txt b/doc/html/_sources/contributing.txt
index e83104db1a5c72517b334c929b4f8bcde1623fce..2828fb187ebe8f6b13116d1e3e966d4e824ae3b1 100644
--- a/doc/html/_sources/contributing.txt
+++ b/doc/html/_sources/contributing.txt
@@ -204,7 +204,7 @@ will provide you with a target ``test_awesome_feature.py_run``.
--------------------------------------------------------------------------------
Writing Documentation
--------------------------------------------------------------------------------
-To create documentation, we use |sphinx|_ to go from |restructuredtext|_
+To create documentation, we use |sphinx|_ to go from |restructuredtext|
(|restructuredtext_abrv|) files and API documentation in source files to HTML
or man pages.
@@ -555,7 +555,6 @@ Now tests should be available by ``make check``, ``make codetest`` and
``make test_something.py_run``.
-.. _restructuredtext: http://docutils.sourceforge.net/rst.html
.. |fedora| replace:: Fedora
.. |nameattr| replace:: :attr:`__name__`
diff --git a/doc/html/buildsystem.html b/doc/html/buildsystem.html
index 82a4b4ce7fdbca0dae91ff5a35f896229bde851f..f166ac3cba940c09def6d50481618f31f6e1639e 100644
--- a/doc/html/buildsystem.html
+++ b/doc/html/buildsystem.html
@@ -186,7 +186,7 @@ configuration also Sphinx with the <tt class="docutils literal"><span class="pre
</div>
<div class="footer">
© Copyright 2013, Bienchen.
- Last updated on Jun 14 19:22, 2014.
+ Last updated on Jun 19 11:04, 2014.
Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.2b1.
</div>
</body>
diff --git a/doc/html/changelog.html b/doc/html/changelog.html
index 8c290bd61b248d092825d92bee7c88ea3db5a9e3..897b211d3de4fc56f253f188d425fce2e0d95192 100644
--- a/doc/html/changelog.html
+++ b/doc/html/changelog.html
@@ -127,7 +127,7 @@
</div>
<div class="footer">
© Copyright 2013, Bienchen.
- Last updated on Jun 14 18:21, 2014.
+ Last updated on Jun 19 11:04, 2014.
Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.2b1.
</div>
</body>
diff --git a/doc/html/contributing.html b/doc/html/contributing.html
index a523228be31d67cd588947f2bb4f365112156ef8..e1db7225f623ca8074e68e55ec4e198bf5ae05c6 100644
--- a/doc/html/contributing.html
+++ b/doc/html/contributing.html
@@ -232,7 +232,7 @@ will provide you with a target <tt class="docutils literal"><span class="pre">te
</div>
<div class="section" id="writing-documentation">
<h2>Writing Documentation<a class="headerlink" href="#writing-documentation" title="Permalink to this headline">ΒΆ</a></h2>
-<p>To create documentation, we use <a class="reference external" href="http://sphinx-doc.org/">Sphinx</a> to go from <a class="reference external" href="http://docutils.sourceforge.net/rst.html">reStructuredText</a>
+<p>To create documentation, we use <a class="reference external" href="http://sphinx-doc.org/">Sphinx</a> to go from reStructuredText
(reST) files and API documentation in source files to HTML
or man pages.</p>
<p>For each module, at least one reST document exists, that
@@ -697,7 +697,7 @@ you.</p>
</div>
<div class="footer">
© Copyright 2013, Bienchen.
- Last updated on Jun 14 19:22, 2014.
+ Last updated on Jun 19 11:36, 2014.
Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.2b1.
</div>
</body>
diff --git a/doc/html/core/argcheck.html b/doc/html/core/argcheck.html
index c6ecdcaaa615c7992598c08c7e09404d348d0352..6830e08598bea94b5a52fc5534ec93c932125b10 100644
--- a/doc/html/core/argcheck.html
+++ b/doc/html/core/argcheck.html
@@ -217,7 +217,7 @@ shell. <tt class="docutils literal"><span class="pre">0</span></tt> is tradition
</div>
<div class="footer">
© Copyright 2013, Bienchen.
- Last updated on Jun 14 18:21, 2014.
+ Last updated on Jun 19 11:04, 2014.
Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.2b1.
</div>
</body>
diff --git a/doc/html/core/index.html b/doc/html/core/index.html
index 1fe5181b6d6cda4b826887796703fdb8a423d5e8..456425c8558c93f07f8f265547846b3aa892fda4 100644
--- a/doc/html/core/index.html
+++ b/doc/html/core/index.html
@@ -123,7 +123,7 @@
</div>
<div class="footer">
© Copyright 2013, Bienchen.
- Last updated on Jun 14 18:21, 2014.
+ Last updated on Jun 19 11:04, 2014.
Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.2b1.
</div>
</body>
diff --git a/doc/html/developers.html b/doc/html/developers.html
index 201c20ec229b9544ad45897ccb1772344169f485..06588d82265fa678df136fe153e1c5523ab38c51 100644
--- a/doc/html/developers.html
+++ b/doc/html/developers.html
@@ -139,7 +139,7 @@
</div>
<div class="footer">
© Copyright 2013, Bienchen.
- Last updated on Jun 14 19:22, 2014.
+ Last updated on Jun 19 11:36, 2014.
Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.2b1.
</div>
</body>
diff --git a/doc/html/genindex.html b/doc/html/genindex.html
index 2ca5e3beac3786d5ff7f9971de7546cd2ae415e5..7bd396ae6df9316e9e19bdb438a5fa7444000db4 100644
--- a/doc/html/genindex.html
+++ b/doc/html/genindex.html
@@ -308,7 +308,7 @@
</div>
<div class="footer">
© Copyright 2013, Bienchen.
- Last updated on Jun 14 19:22, 2014.
+ Last updated on Jun 19 11:36, 2014.
Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.2b1.
</div>
</body>
diff --git a/doc/html/index.html b/doc/html/index.html
index 97396da1ba57c33d8e8e04bfa1a107fb3885d51c..55592275790d456e43399e973fec6266f9c90df5 100644
--- a/doc/html/index.html
+++ b/doc/html/index.html
@@ -134,7 +134,7 @@
</div>
<div class="footer">
© Copyright 2013, Bienchen.
- Last updated on Jun 14 19:22, 2014.
+ Last updated on Jun 19 11:36, 2014.
Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.2b1.
</div>
</body>
diff --git a/doc/html/meld/index.html b/doc/html/meld/index.html
index 68e4bce984ff3fabd77867ce5392a53e4248c3e4..ee4af64ac7bbe3a199af6eb92190138c8bec0cc2 100644
--- a/doc/html/meld/index.html
+++ b/doc/html/meld/index.html
@@ -127,7 +127,7 @@
</div>
<div class="footer">
© Copyright 2013, Bienchen.
- Last updated on Jun 14 18:21, 2014.
+ Last updated on Jun 19 11:04, 2014.
Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.2b1.
</div>
</body>
diff --git a/doc/html/meld/loop.html b/doc/html/meld/loop.html
index e94d15777f4e5322ed88aaba824058b23ee8de17..9c486901bd05513404169dd1c46fe210ee4c0746 100644
--- a/doc/html/meld/loop.html
+++ b/doc/html/meld/loop.html
@@ -338,7 +338,7 @@ extension of the gap.</p>
</div>
<div class="footer">
© Copyright 2013, Bienchen.
- Last updated on Jun 14 18:21, 2014.
+ Last updated on Jun 19 11:04, 2014.
Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.2b1.
</div>
</body>
diff --git a/doc/html/meld/rawmodel.html b/doc/html/meld/rawmodel.html
index b721bd82c916d6e5c2820b50428c5621a13d7079..2ada8943e78f374c805283ff302d719f60edf4c6 100644
--- a/doc/html/meld/rawmodel.html
+++ b/doc/html/meld/rawmodel.html
@@ -221,7 +221,7 @@ missing or incomplete backbone coordinates in the template structure.</p>
</div>
<div class="footer">
© Copyright 2013, Bienchen.
- Last updated on Jun 14 18:21, 2014.
+ Last updated on Jun 19 11:04, 2014.
Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.2b1.
</div>
</body>
diff --git a/doc/html/py-modindex.html b/doc/html/py-modindex.html
index 5fdf3629560ddc601ea68faaeaf50e8c01fb0bea..641099bfe8e3a520c33346ee100507efaadddea6 100644
--- a/doc/html/py-modindex.html
+++ b/doc/html/py-modindex.html
@@ -113,7 +113,7 @@
</div>
<div class="footer">
© Copyright 2013, Bienchen.
- Last updated on Jun 14 19:22, 2014.
+ Last updated on Jun 19 11:36, 2014.
Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.2b1.
</div>
</body>
diff --git a/doc/html/search.html b/doc/html/search.html
index e4cd620c17989bf229f51461d85841d842796376..dbfa8d260b93483448f6c6ba6c2c2745e9f5f597 100644
--- a/doc/html/search.html
+++ b/doc/html/search.html
@@ -99,7 +99,7 @@
</div>
<div class="footer">
© Copyright 2013, Bienchen.
- Last updated on Jun 14 19:22, 2014.
+ Last updated on Jun 19 11:36, 2014.
Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.2b1.
</div>
</body>
diff --git a/doc/html/searchindex.js b/doc/html/searchindex.js
index fabc95463533a5787dd5b15f453f461e87b5c940..9487f75efd2133ed092d08213aeb72cc4ade1269 100644
--- a/doc/html/searchindex.js
+++ b/doc/html/searchindex.js
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diff --git a/doc/html/users.html b/doc/html/users.html
index 3de4fbbf01838cd33b3175f280b43dae0c5a94ac..1da95c9d164c976ae56567a70f2d22ac0507ab7a 100644
--- a/doc/html/users.html
+++ b/doc/html/users.html
@@ -110,7 +110,7 @@
</div>
<div class="footer">
© Copyright 2013, Bienchen.
- Last updated on Jun 14 18:21, 2014.
+ Last updated on Jun 19 11:04, 2014.
Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.2b1.
</div>
</body>