diff --git a/extras/scoring_weight_training/analyze_bft_candidates.py b/extras/scoring_weight_training/analyze_bft_candidates.py
index e4cdd20f8d4878487a599c3077e7765f657570bc..e612725449d3dfac914565cad6bad630aa0a8c9e 100644
--- a/extras/scoring_weight_training/analyze_bft_candidates.py
+++ b/extras/scoring_weight_training/analyze_bft_candidates.py
@@ -86,7 +86,7 @@ if not os.path.exists(out_path):
   print "Creating output folder", out_path
   os.mkdir(out_path)
 
-# how quick to load, how much mem wasted?
+# load input data
 bft = np.load(in_loop_bft)
 json_obj = json.load(open(in_loop_infos, "r"))
 loop_data_keys = json_obj["loop_data_keys"]
diff --git a/extras/scoring_weight_training/analyze_bft_scores.py b/extras/scoring_weight_training/analyze_bft_scores.py
index 94c8eb40eb4e49b209410a7bb08295dd3c884f50..76118ce98d3f6a7ae983a36a211645ca05036ce6 100644
--- a/extras/scoring_weight_training/analyze_bft_scores.py
+++ b/extras/scoring_weight_training/analyze_bft_scores.py
@@ -133,7 +133,7 @@ if not os.path.exists(out_path):
   print "Creating output folder", out_path
   os.mkdir(out_path)
 
-# how quick to load, how much mem wasted?
+# load input data
 bft = np.load(in_loop_bft)
 json_obj = json.load(open(in_loop_infos, "r"))
 loop_data_keys = json_obj["loop_data_keys"]
diff --git a/sidechain/doc/reconstruct.rst b/sidechain/doc/reconstruct.rst
index ff0e9c2fbdcb2474f4bed561a642c3e718d9c723..e778ffc06460e9b4c1a153b88be95ad8a8002790 100644
--- a/sidechain/doc/reconstruct.rst
+++ b/sidechain/doc/reconstruct.rst
@@ -87,10 +87,8 @@ SidechainReconstructor Class
              to an environment or if parameters lead to invalid / unset
              positions in environment.
 
-  .. method:: AttachEnvironment(env, use_frm=True, use_bbdep_lib=True, \
-                                consider_hbonds=True)
-              AttachEnvironment(env, use_frm, rotamer_library, \
-                                consider_hbonds=True)
+  .. method:: AttachEnvironment(env, use_frm=True, use_bbdep_lib=True)
+              AttachEnvironment(env, use_frm, rotamer_library)
     
     Link reconstructor to given *env*. A helper class is used in the background
     to provide sidechain-objects for the environment. As this class is reused by
@@ -108,10 +106,6 @@ SidechainReconstructor Class
     :type use_bbdep_lib:  :class:`bool`
     :param rotamer_library: Custom rotamer library to be used.
     :type rotamer_library:  :class:`BBDepRotamerLib` / :class:`RotamerLib`
-    :param consider_hbonds: Flag, whether hbonds should be evaluated in the
-                            energy function. If set to False, no hydrogens will
-                            be built when building rotamers and frames.
-    :type consider_hbonds: :class:`bool`
 
     :raises: :exc:`~exceptions.RuntimeError` if *env* was already linked to
             another reconstructor with inconsistent parameters. Acceptable
diff --git a/sidechain/pymod/_reconstruct_sidechains.py b/sidechain/pymod/_reconstruct_sidechains.py
index 8a2ced98b9dc1ffe58177726e788b39358cdf7f6..ce043c8affd8af53f0b0518ee2292356d84412d7 100644
--- a/sidechain/pymod/_reconstruct_sidechains.py
+++ b/sidechain/pymod/_reconstruct_sidechains.py
@@ -398,11 +398,6 @@ def Reconstruct(ent, keep_sidechains=False, build_disulfids=True,
     :param rotamer_model: Rotamer model to be used, can either be "frm" or "rrm"
     :type rotamer_model:  :class:`str`
 
-    :param consider_hbonds: Flag, whether hbonds should be evaluated in the
-                            energy function. If set to False, no hydrogens will
-                            be built when building rotamers and frame.
-    :type consider_hbonds:  :class:`bool`
-
     :param consider_ligands: Flag, whether to add ligands (anything in chain
                              '_') as static objects.
     :type consider_ligands:  :class:`bool`