From c380ffb77d1369ee1ebf0c97bdd2e5d176245b98 Mon Sep 17 00:00:00 2001
From: JoanaMPereira <pereira.joanam@gmail.com>
Date: Thu, 21 Mar 2024 11:09:08 +0100
Subject: [PATCH] ignore barros-created pdb files if they are in the input
 folder

---
 barrOs_library.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/barrOs_library.py b/barrOs_library.py
index da22e1d..b92733e 100644
--- a/barrOs_library.py
+++ b/barrOs_library.py
@@ -349,7 +349,7 @@ def get_all_pdbIDs(input_files, input_types):
             pdb_file = input_string
             pdbIDs.append(pdb_file)
         elif input_types[i] == 'pdb_folder':
-            pdb_files = ['{}/{}'.format(input_string, f) for f in os.listdir(input_string) if f.endswith('.pdb')]
+            pdb_files = ['{}/{}'.format(input_string, f) for f in os.listdir(input_string) if f.endswith('.pdb') and 'barrelOnly' not in f and 'moved_to_reference' not in f]
             pdbIDs += pdb_files
         elif input_types[i] == 'pdbID':
             pdbIDs.append(input_string)
-- 
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