From be3f904fa3b5f67a981f2ae3ce1dc134136dc773 Mon Sep 17 00:00:00 2001
From: B13nch3n <b13nch3n_01@theb-si.de>
Date: Thu, 15 Sep 2022 22:46:47 +0200
Subject: [PATCH] Extend todo list, improve Dockerfile
---
Dockerfile | 2 +-
translate2modelcif.py | 1 +
2 files changed, 2 insertions(+), 1 deletion(-)
diff --git a/Dockerfile b/Dockerfile
index 8b8dd17..3e40890 100644
--- a/Dockerfile
+++ b/Dockerfile
@@ -25,7 +25,7 @@ WORKDIR ${SRC_DIR}
RUN set -e pipefail; \
apt-get update -y; \
# for development, install venv
- apt-get install -y git pip python3.8-venv; \
+ apt-get install -y git pip; \
pip install -r requirements.txt; \
# for development, install black & PyLint
pip install black pylint; \
diff --git a/translate2modelcif.py b/translate2modelcif.py
index cc19cc3..24691d9 100644
--- a/translate2modelcif.py
+++ b/translate2modelcif.py
@@ -410,6 +410,7 @@ def _get_protocol_steps_and_software(config_data):
"name": "MMseqs2",
"classification": "data collection",
"description": "Many-against-Many sequence searching",
+ # ToDo: add citation to ihm.citations
"citation": ihm.Citation(
pmid="30615063",
title="MMseqs2 desktop and local web server app for fast, "
--
GitLab