From 74d8260e723562b1797e8284503d4552111e6cfb Mon Sep 17 00:00:00 2001
From: Gerardo Tauriello <gerardo.tauriello@unibas.ch>
Date: Thu, 22 Aug 2024 17:57:19 +0200
Subject: [PATCH] New folder naming with date and MA-ID
---
.../README.md | 0
.../translate2modelcif.py | 0
.../README.md | 0
.../translate2modelcif.py | 0
.../README.md | 0
...Q9Y5J9-Q9Y5L4_unrelaxed_rank_1_model_5.pdb | 0
...9Y5L4_unrelaxed_rank_1_model_5_scores.json | 0
...Q9Y5J9-Q9Y5L4_unrelaxed_rank_2_model_4.pdb | 0
...9Y5L4_unrelaxed_rank_2_model_4_scores.json | 0
...Q9Y5J9-Q9Y5L4_unrelaxed_rank_3_model_3.pdb | 0
...9Y5L4_unrelaxed_rank_3_model_3_scores.json | 0
...Q9Y5J9-Q9Y5L4_unrelaxed_rank_4_model_2.pdb | 0
...9Y5L4_unrelaxed_rank_4_model_2_scores.json | 0
...Q9Y5J9-Q9Y5L4_unrelaxed_rank_5_model_1.pdb | 0
...9Y5L4_unrelaxed_rank_5_model_1_scores.json | 0
.../example/Q9Y5J9-Q9Y5L4/config.json | 0
.../translate2modelcif.py | 0
.../README.md | 0
.../translate2modelcif.py | 0
.../README.md | 0
.../translate2modelcif.py | 0
.../README.md | 0
.../input_data/accessions.csv | 0
.../input_data/structures.zip | Bin
.../translate2modelcif.py | 0
.../README.md | 0
.../minimal_example/Annotations.csv | 0
.../minimal_example/Annotations.json | 0
.../Config_Files/config_1.json | 0
.../Config_Files/config_2.json | 0
.../Zip_Files/692-Ubiquitin_SKP1.zip | Bin
.../692-Ubiquitin_SKP1.cif | 0
.../692-Ubiquitin_SKP1.zip | Bin
.../minimal_example_modelcif/issues.json | 0
.../translate2modelcif.py | 0
.../README.md | 0
.../expected_output_modelcif.zip | Bin
.../modelarchive_submission.zip | Bin
.../translate2modelcif.py | 0
projects/README.md | 2 +-
projects/README.template | 20 ++++++++----------
41 files changed, 10 insertions(+), 12 deletions(-)
rename projects/{CoFFE-sponge-proteins => 2022-08-ma-coffe-slac}/README.md (100%)
rename projects/{CoFFE-sponge-proteins => 2022-08-ma-coffe-slac}/translate2modelcif.py (100%)
rename projects/{USDA-ASFVG => 2022-10-ma-asfv-asfvg}/README.md (100%)
rename projects/{USDA-ASFVG => 2022-10-ma-asfv-asfvg}/translate2modelcif.py (100%)
rename projects/{human-heterodimers-w-crosslinks => 2022-11-ma-low-csi}/README.md (100%)
rename projects/{human-heterodimers-w-crosslinks => 2022-11-ma-low-csi}/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_1_model_5.pdb (100%)
rename projects/{human-heterodimers-w-crosslinks => 2022-11-ma-low-csi}/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_1_model_5_scores.json (100%)
rename projects/{human-heterodimers-w-crosslinks => 2022-11-ma-low-csi}/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_2_model_4.pdb (100%)
rename projects/{human-heterodimers-w-crosslinks => 2022-11-ma-low-csi}/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_2_model_4_scores.json (100%)
rename projects/{human-heterodimers-w-crosslinks => 2022-11-ma-low-csi}/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_3_model_3.pdb (100%)
rename projects/{human-heterodimers-w-crosslinks => 2022-11-ma-low-csi}/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_3_model_3_scores.json (100%)
rename projects/{human-heterodimers-w-crosslinks => 2022-11-ma-low-csi}/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_4_model_2.pdb (100%)
rename projects/{human-heterodimers-w-crosslinks => 2022-11-ma-low-csi}/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_4_model_2_scores.json (100%)
rename projects/{human-heterodimers-w-crosslinks => 2022-11-ma-low-csi}/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_5_model_1.pdb (100%)
rename projects/{human-heterodimers-w-crosslinks => 2022-11-ma-low-csi}/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_5_model_1_scores.json (100%)
rename projects/{human-heterodimers-w-crosslinks => 2022-11-ma-low-csi}/example/Q9Y5J9-Q9Y5L4/config.json (100%)
rename projects/{human-heterodimers-w-crosslinks => 2022-11-ma-low-csi}/translate2modelcif.py (100%)
rename projects/{cancer-PPI-domains => 2022-12-ma-t3vr3}/README.md (100%)
rename projects/{cancer-PPI-domains => 2022-12-ma-t3vr3}/translate2modelcif.py (100%)
rename projects/{dark-matter-metagenomics => 2023-10-ma-nmpfamsdb}/README.md (100%)
rename projects/{dark-matter-metagenomics => 2023-10-ma-nmpfamsdb}/translate2modelcif.py (100%)
rename projects/{phytoplasma-effectors => 2023-10-ma-saps}/README.md (100%)
rename projects/{phytoplasma-effectors => 2023-10-ma-saps}/input_data/accessions.csv (100%)
rename projects/{phytoplasma-effectors => 2023-10-ma-saps}/input_data/structures.zip (100%)
rename projects/{phytoplasma-effectors => 2023-10-ma-saps}/translate2modelcif.py (100%)
rename projects/{PRC-complexes => 2024-04-ma-dm-prc}/README.md (100%)
rename projects/{PRC-complexes => 2024-04-ma-dm-prc}/minimal_example/Annotations.csv (100%)
rename projects/{PRC-complexes => 2024-04-ma-dm-prc}/minimal_example/Annotations.json (100%)
rename projects/{PRC-complexes => 2024-04-ma-dm-prc}/minimal_example/Config_Files/config_1.json (100%)
rename projects/{PRC-complexes => 2024-04-ma-dm-prc}/minimal_example/Config_Files/config_2.json (100%)
rename projects/{PRC-complexes => 2024-04-ma-dm-prc}/minimal_example/Zip_Files/692-Ubiquitin_SKP1.zip (100%)
rename projects/{PRC-complexes => 2024-04-ma-dm-prc}/minimal_example_modelcif/692-Ubiquitin_SKP1.cif (100%)
rename projects/{PRC-complexes => 2024-04-ma-dm-prc}/minimal_example_modelcif/692-Ubiquitin_SKP1.zip (100%)
rename projects/{PRC-complexes => 2024-04-ma-dm-prc}/minimal_example_modelcif/issues.json (100%)
rename projects/{PRC-complexes => 2024-04-ma-dm-prc}/translate2modelcif.py (100%)
rename projects/{PP2A-B55-design => 2024-07-ma-osf-ppp2r2a}/README.md (100%)
rename projects/{PP2A-B55-design => 2024-07-ma-osf-ppp2r2a}/expected_output_modelcif.zip (100%)
rename projects/{PP2A-B55-design => 2024-07-ma-osf-ppp2r2a}/modelarchive_submission.zip (100%)
rename projects/{PP2A-B55-design => 2024-07-ma-osf-ppp2r2a}/translate2modelcif.py (100%)
diff --git a/projects/CoFFE-sponge-proteins/README.md b/projects/2022-08-ma-coffe-slac/README.md
similarity index 100%
rename from projects/CoFFE-sponge-proteins/README.md
rename to projects/2022-08-ma-coffe-slac/README.md
diff --git a/projects/CoFFE-sponge-proteins/translate2modelcif.py b/projects/2022-08-ma-coffe-slac/translate2modelcif.py
similarity index 100%
rename from projects/CoFFE-sponge-proteins/translate2modelcif.py
rename to projects/2022-08-ma-coffe-slac/translate2modelcif.py
diff --git a/projects/USDA-ASFVG/README.md b/projects/2022-10-ma-asfv-asfvg/README.md
similarity index 100%
rename from projects/USDA-ASFVG/README.md
rename to projects/2022-10-ma-asfv-asfvg/README.md
diff --git a/projects/USDA-ASFVG/translate2modelcif.py b/projects/2022-10-ma-asfv-asfvg/translate2modelcif.py
similarity index 100%
rename from projects/USDA-ASFVG/translate2modelcif.py
rename to projects/2022-10-ma-asfv-asfvg/translate2modelcif.py
diff --git a/projects/human-heterodimers-w-crosslinks/README.md b/projects/2022-11-ma-low-csi/README.md
similarity index 100%
rename from projects/human-heterodimers-w-crosslinks/README.md
rename to projects/2022-11-ma-low-csi/README.md
diff --git a/projects/human-heterodimers-w-crosslinks/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_1_model_5.pdb b/projects/2022-11-ma-low-csi/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_1_model_5.pdb
similarity index 100%
rename from projects/human-heterodimers-w-crosslinks/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_1_model_5.pdb
rename to projects/2022-11-ma-low-csi/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_1_model_5.pdb
diff --git a/projects/human-heterodimers-w-crosslinks/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_1_model_5_scores.json b/projects/2022-11-ma-low-csi/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_1_model_5_scores.json
similarity index 100%
rename from projects/human-heterodimers-w-crosslinks/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_1_model_5_scores.json
rename to projects/2022-11-ma-low-csi/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_1_model_5_scores.json
diff --git a/projects/human-heterodimers-w-crosslinks/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_2_model_4.pdb b/projects/2022-11-ma-low-csi/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_2_model_4.pdb
similarity index 100%
rename from projects/human-heterodimers-w-crosslinks/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_2_model_4.pdb
rename to projects/2022-11-ma-low-csi/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_2_model_4.pdb
diff --git a/projects/human-heterodimers-w-crosslinks/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_2_model_4_scores.json b/projects/2022-11-ma-low-csi/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_2_model_4_scores.json
similarity index 100%
rename from projects/human-heterodimers-w-crosslinks/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_2_model_4_scores.json
rename to projects/2022-11-ma-low-csi/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_2_model_4_scores.json
diff --git a/projects/human-heterodimers-w-crosslinks/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_3_model_3.pdb b/projects/2022-11-ma-low-csi/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_3_model_3.pdb
similarity index 100%
rename from projects/human-heterodimers-w-crosslinks/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_3_model_3.pdb
rename to projects/2022-11-ma-low-csi/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_3_model_3.pdb
diff --git a/projects/human-heterodimers-w-crosslinks/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_3_model_3_scores.json b/projects/2022-11-ma-low-csi/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_3_model_3_scores.json
similarity index 100%
rename from projects/human-heterodimers-w-crosslinks/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_3_model_3_scores.json
rename to projects/2022-11-ma-low-csi/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_3_model_3_scores.json
diff --git a/projects/human-heterodimers-w-crosslinks/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_4_model_2.pdb b/projects/2022-11-ma-low-csi/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_4_model_2.pdb
similarity index 100%
rename from projects/human-heterodimers-w-crosslinks/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_4_model_2.pdb
rename to projects/2022-11-ma-low-csi/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_4_model_2.pdb
diff --git a/projects/human-heterodimers-w-crosslinks/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_4_model_2_scores.json b/projects/2022-11-ma-low-csi/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_4_model_2_scores.json
similarity index 100%
rename from projects/human-heterodimers-w-crosslinks/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_4_model_2_scores.json
rename to projects/2022-11-ma-low-csi/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_4_model_2_scores.json
diff --git a/projects/human-heterodimers-w-crosslinks/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_5_model_1.pdb b/projects/2022-11-ma-low-csi/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_5_model_1.pdb
similarity index 100%
rename from projects/human-heterodimers-w-crosslinks/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_5_model_1.pdb
rename to projects/2022-11-ma-low-csi/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_5_model_1.pdb
diff --git a/projects/human-heterodimers-w-crosslinks/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_5_model_1_scores.json b/projects/2022-11-ma-low-csi/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_5_model_1_scores.json
similarity index 100%
rename from projects/human-heterodimers-w-crosslinks/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_5_model_1_scores.json
rename to projects/2022-11-ma-low-csi/example/Q9Y5J9-Q9Y5L4/Q9Y5J9-Q9Y5L4_unrelaxed_rank_5_model_1_scores.json
diff --git a/projects/human-heterodimers-w-crosslinks/example/Q9Y5J9-Q9Y5L4/config.json b/projects/2022-11-ma-low-csi/example/Q9Y5J9-Q9Y5L4/config.json
similarity index 100%
rename from projects/human-heterodimers-w-crosslinks/example/Q9Y5J9-Q9Y5L4/config.json
rename to projects/2022-11-ma-low-csi/example/Q9Y5J9-Q9Y5L4/config.json
diff --git a/projects/human-heterodimers-w-crosslinks/translate2modelcif.py b/projects/2022-11-ma-low-csi/translate2modelcif.py
similarity index 100%
rename from projects/human-heterodimers-w-crosslinks/translate2modelcif.py
rename to projects/2022-11-ma-low-csi/translate2modelcif.py
diff --git a/projects/cancer-PPI-domains/README.md b/projects/2022-12-ma-t3vr3/README.md
similarity index 100%
rename from projects/cancer-PPI-domains/README.md
rename to projects/2022-12-ma-t3vr3/README.md
diff --git a/projects/cancer-PPI-domains/translate2modelcif.py b/projects/2022-12-ma-t3vr3/translate2modelcif.py
similarity index 100%
rename from projects/cancer-PPI-domains/translate2modelcif.py
rename to projects/2022-12-ma-t3vr3/translate2modelcif.py
diff --git a/projects/dark-matter-metagenomics/README.md b/projects/2023-10-ma-nmpfamsdb/README.md
similarity index 100%
rename from projects/dark-matter-metagenomics/README.md
rename to projects/2023-10-ma-nmpfamsdb/README.md
diff --git a/projects/dark-matter-metagenomics/translate2modelcif.py b/projects/2023-10-ma-nmpfamsdb/translate2modelcif.py
similarity index 100%
rename from projects/dark-matter-metagenomics/translate2modelcif.py
rename to projects/2023-10-ma-nmpfamsdb/translate2modelcif.py
diff --git a/projects/phytoplasma-effectors/README.md b/projects/2023-10-ma-saps/README.md
similarity index 100%
rename from projects/phytoplasma-effectors/README.md
rename to projects/2023-10-ma-saps/README.md
diff --git a/projects/phytoplasma-effectors/input_data/accessions.csv b/projects/2023-10-ma-saps/input_data/accessions.csv
similarity index 100%
rename from projects/phytoplasma-effectors/input_data/accessions.csv
rename to projects/2023-10-ma-saps/input_data/accessions.csv
diff --git a/projects/phytoplasma-effectors/input_data/structures.zip b/projects/2023-10-ma-saps/input_data/structures.zip
similarity index 100%
rename from projects/phytoplasma-effectors/input_data/structures.zip
rename to projects/2023-10-ma-saps/input_data/structures.zip
diff --git a/projects/phytoplasma-effectors/translate2modelcif.py b/projects/2023-10-ma-saps/translate2modelcif.py
similarity index 100%
rename from projects/phytoplasma-effectors/translate2modelcif.py
rename to projects/2023-10-ma-saps/translate2modelcif.py
diff --git a/projects/PRC-complexes/README.md b/projects/2024-04-ma-dm-prc/README.md
similarity index 100%
rename from projects/PRC-complexes/README.md
rename to projects/2024-04-ma-dm-prc/README.md
diff --git a/projects/PRC-complexes/minimal_example/Annotations.csv b/projects/2024-04-ma-dm-prc/minimal_example/Annotations.csv
similarity index 100%
rename from projects/PRC-complexes/minimal_example/Annotations.csv
rename to projects/2024-04-ma-dm-prc/minimal_example/Annotations.csv
diff --git a/projects/PRC-complexes/minimal_example/Annotations.json b/projects/2024-04-ma-dm-prc/minimal_example/Annotations.json
similarity index 100%
rename from projects/PRC-complexes/minimal_example/Annotations.json
rename to projects/2024-04-ma-dm-prc/minimal_example/Annotations.json
diff --git a/projects/PRC-complexes/minimal_example/Config_Files/config_1.json b/projects/2024-04-ma-dm-prc/minimal_example/Config_Files/config_1.json
similarity index 100%
rename from projects/PRC-complexes/minimal_example/Config_Files/config_1.json
rename to projects/2024-04-ma-dm-prc/minimal_example/Config_Files/config_1.json
diff --git a/projects/PRC-complexes/minimal_example/Config_Files/config_2.json b/projects/2024-04-ma-dm-prc/minimal_example/Config_Files/config_2.json
similarity index 100%
rename from projects/PRC-complexes/minimal_example/Config_Files/config_2.json
rename to projects/2024-04-ma-dm-prc/minimal_example/Config_Files/config_2.json
diff --git a/projects/PRC-complexes/minimal_example/Zip_Files/692-Ubiquitin_SKP1.zip b/projects/2024-04-ma-dm-prc/minimal_example/Zip_Files/692-Ubiquitin_SKP1.zip
similarity index 100%
rename from projects/PRC-complexes/minimal_example/Zip_Files/692-Ubiquitin_SKP1.zip
rename to projects/2024-04-ma-dm-prc/minimal_example/Zip_Files/692-Ubiquitin_SKP1.zip
diff --git a/projects/PRC-complexes/minimal_example_modelcif/692-Ubiquitin_SKP1.cif b/projects/2024-04-ma-dm-prc/minimal_example_modelcif/692-Ubiquitin_SKP1.cif
similarity index 100%
rename from projects/PRC-complexes/minimal_example_modelcif/692-Ubiquitin_SKP1.cif
rename to projects/2024-04-ma-dm-prc/minimal_example_modelcif/692-Ubiquitin_SKP1.cif
diff --git a/projects/PRC-complexes/minimal_example_modelcif/692-Ubiquitin_SKP1.zip b/projects/2024-04-ma-dm-prc/minimal_example_modelcif/692-Ubiquitin_SKP1.zip
similarity index 100%
rename from projects/PRC-complexes/minimal_example_modelcif/692-Ubiquitin_SKP1.zip
rename to projects/2024-04-ma-dm-prc/minimal_example_modelcif/692-Ubiquitin_SKP1.zip
diff --git a/projects/PRC-complexes/minimal_example_modelcif/issues.json b/projects/2024-04-ma-dm-prc/minimal_example_modelcif/issues.json
similarity index 100%
rename from projects/PRC-complexes/minimal_example_modelcif/issues.json
rename to projects/2024-04-ma-dm-prc/minimal_example_modelcif/issues.json
diff --git a/projects/PRC-complexes/translate2modelcif.py b/projects/2024-04-ma-dm-prc/translate2modelcif.py
similarity index 100%
rename from projects/PRC-complexes/translate2modelcif.py
rename to projects/2024-04-ma-dm-prc/translate2modelcif.py
diff --git a/projects/PP2A-B55-design/README.md b/projects/2024-07-ma-osf-ppp2r2a/README.md
similarity index 100%
rename from projects/PP2A-B55-design/README.md
rename to projects/2024-07-ma-osf-ppp2r2a/README.md
diff --git a/projects/PP2A-B55-design/expected_output_modelcif.zip b/projects/2024-07-ma-osf-ppp2r2a/expected_output_modelcif.zip
similarity index 100%
rename from projects/PP2A-B55-design/expected_output_modelcif.zip
rename to projects/2024-07-ma-osf-ppp2r2a/expected_output_modelcif.zip
diff --git a/projects/PP2A-B55-design/modelarchive_submission.zip b/projects/2024-07-ma-osf-ppp2r2a/modelarchive_submission.zip
similarity index 100%
rename from projects/PP2A-B55-design/modelarchive_submission.zip
rename to projects/2024-07-ma-osf-ppp2r2a/modelarchive_submission.zip
diff --git a/projects/PP2A-B55-design/translate2modelcif.py b/projects/2024-07-ma-osf-ppp2r2a/translate2modelcif.py
similarity index 100%
rename from projects/PP2A-B55-design/translate2modelcif.py
rename to projects/2024-07-ma-osf-ppp2r2a/translate2modelcif.py
diff --git a/projects/README.md b/projects/README.md
index 8e5fb91..e730261 100644
--- a/projects/README.md
+++ b/projects/README.md
@@ -2,7 +2,7 @@
This directory tree contains tools/ code from past modelling projects converted to [ModelCIF](https://mmcif.wwpdb.org/dictionaries/mmcif_ma.dic/Index/) for [MA](https://www.modelarchive.org).
-Each project should come with a small README explaining the modelling project. This will help you checking if your project is of same kind.
+Each project should come with a small README explaining the modelling project. This will help you checking if your project is of same kind. The project folders are named as [YYYY-MM]-[MA-ID] according to the year and month when the conversion was done and the ID in ModelArchive.
The [`docker`](projects/docker/) directory does not host a modelling project. It keeps the set up of a [Docker](https://www.docker.com) image that can be used to run the converter tools from the various projects.
diff --git a/projects/README.template b/projects/README.template
index d648de9..338d14a 100644
--- a/projects/README.template
+++ b/projects/README.template
@@ -1,17 +1,15 @@
# Modelling ...
-<link to project in MA>
+[Link to project in ModelArchive](https://www.modelarchive.org/doi/10.5452/...) (incl. background on project itself and link to the publication)
-<link to project publication>
+Input files for conversion:
+...
-<hint if this is part of a multi-model-type project>
+Modelling setup:
+...
-<very concise project description>
+Special features here:
+...
-<how are the ModelCIF files created using this software>
-
-These models qualify as "<model type>".
-
-## Tips & Tricks for writing a protject's README.md
-
-- when mentioning taxa, put them italic using '\*' like \*Taxon\*
+Content:
+...
--
GitLab