From aac3c42434682aabe45a2f4a0c2e5b74bfdf9de8 Mon Sep 17 00:00:00 2001 From: B13nch3n <b13nch3n_01@theb-si.de> Date: Wed, 5 Oct 2022 15:53:22 +0200 Subject: [PATCH] Started README.md --- projects/README.template | 8 +++++++- .../human-heterodimers-w-crosslinks/README.md | 15 +++++++++++++++ 2 files changed, 22 insertions(+), 1 deletion(-) create mode 100644 projects/human-heterodimers-w-crosslinks/README.md diff --git a/projects/README.template b/projects/README.template index 300b8b3..d648de9 100644 --- a/projects/README.template +++ b/projects/README.template @@ -2,10 +2,16 @@ <link to project in MA> +<link to project publication> + <hint if this is part of a multi-model-type project> <very concise project description> <how are the ModelCIF files created using this software> -These models qualify as "<model type>". \ No newline at end of file +These models qualify as "<model type>". + +## Tips & Tricks for writing a protject's README.md + +- when mentioning taxa, put them italic using '\*' like \*Taxon\* diff --git a/projects/human-heterodimers-w-crosslinks/README.md b/projects/human-heterodimers-w-crosslinks/README.md new file mode 100644 index 0000000..2ebf0be --- /dev/null +++ b/projects/human-heterodimers-w-crosslinks/README.md @@ -0,0 +1,15 @@ +# Modelling protein-interactions of human proteins with experimental crosslinking information + +**I.O.U. the link to the ModelArchive entry** + +**I.O.U. the link to the publication** + +This project consists of around 800 heterodimer models for the human reference proteome. Modelling was done with [ColabFold](https://colabfold.mmseqs.com)/ [LocalColabFold](https://github.com/YoshitakaMo/localcolabfold). Model selection is special in a sense that for some heterodimers experimental crosslinking data is available guiding the choice, otherwise top-ranking models are used. + +<how are the ModelCIF files created using this software> + +These models qualify as "de novo modelling". + +<!-- LocalWords: crosslinking ModelArchive heterodimer ColabFold de novo + LocalWords: LocalColabFold heterodimers + --> -- GitLab