From e427a626350926a8b7f96cc3c0266b9db33b520c Mon Sep 17 00:00:00 2001
From: Stefan Bienert <stefan.bienert@unibas.ch>
Date: Wed, 7 Dec 2022 15:53:59 +0100
Subject: [PATCH] Add comment for reading single files from URL for validation.
---
validation/validate-mmcif-file.py | 3 +++
1 file changed, 3 insertions(+)
diff --git a/validation/validate-mmcif-file.py b/validation/validate-mmcif-file.py
index 252c334..f5aa7bf 100755
--- a/validation/validate-mmcif-file.py
+++ b/validation/validate-mmcif-file.py
@@ -297,6 +297,9 @@ def _get_associated_files(model_cif_file, assoc_dir):
)
if row[idxs["file_format"]] != "cif":
continue
+ # this should be easy to make reading URLs, using
+ # _get_assoc_obj(row[idxs["file_url"]], assoc_dir) but for now
+ # I have not seen the use case (no web server at hand for testing)
data = _read_mmcif(os.path.join(assoc_dir, row[idxs["file_url"]]))
assoc_files.append((data, row[idxs["entry_id"]]))
# make sure entry_id is matching in associated file!
--
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