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FindSpNav.cmake

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  • io_manager.hh 5.90 KiB
    //------------------------------------------------------------------------------
    // This file is part of the OpenStructure project <www.openstructure.org>
    //
    // Copyright (C) 2008-2010 by the OpenStructure authors
    //
    // This library is free software; you can redistribute it and/or modify it under
    // the terms of the GNU Lesser General Public License as published by the Free
    // Software Foundation; either version 3.0 of the License, or (at your option)
    // any later version.
    // This library is distributed in the hope that it will be useful, but WITHOUT
    // ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
    // FOR A PARTICULAR PURPOSE.  See the GNU Lesser General Public License for more
    // details.
    //
    // You should have received a copy of the GNU Lesser General Public License
    // along with this library; if not, write to the Free Software Foundation, Inc.,
    // 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301  USA
    //------------------------------------------------------------------------------
    #ifndef OST_IO_MANAGER_H
    #define OST_IO_MANAGER_H
    
    #include <vector>
    
    #include <ost/config.hh>
    #include <ost/io/module_config.hh>
    #include <ost/mol/mol.hh>
    
    #include <ost/io/mol/entity_io_handler.hh>
    #include <ost/io/seq/sequence_io_handler.hh>
    #include <ost/io/mol/surface_io_handler.hh>
    
    #if OST_IMG_ENABLED
    #  include <ost/io/img/map_io_handler.hh>
    #endif
    
    #include <ost/io/io_exception.hh>
    namespace ost { namespace io {
    
    typedef std::vector<EntityIOHandlerFactoryBaseP> EntityIOHFList;
    typedef std::vector<SequenceIOHandlerFactoryBasePtr> AlignmentIOFList;
    typedef std::vector<SurfaceIOHandlerFactoryBasePtr> SurfaceIOFList;
    
    #if OST_IMG_ENABLED
      typedef std::vector<MapIOHandlerFactoryBasePtr> MapIOFList;  
    #endif
    
    /// \brief Central registry for input/output handlers
    class DLLEXPORT_OST_IO IOManager {
    public:
      /// \brief get entity io handler that is able to import the given file.
      ///
      /// Find EntityIOHandler that provides import for the given file. The method
      /// will return the first EntityIOHandler in chain that is able to import the
      /// file either bases on the \var filename, or, if provided, by \var format.
      ///
      /// \param filename  The filename of the file to export. Most IOHandlers 
      ///    will use the file extension to find out if the can import the file but 
      ///    may also implement more elaborate methods such as magic number matching.
      /// \param format If set to any other value than auto, the IO handlers will 
      ///    treat \c filename as if \c format were the file extension (without 
      ///    the dot).
      /// \return The first EntityIOHandler in chain that provides import or a 
      ///    null pointer if no importer is able to load the  file.
      /// \sa FindEntityExportHandler(const String&,const String&)
      EntityIOHandlerP FindEntityImportHandler(const String& filename, 
                                               const String& format="auto");
                                               
      /// \brief get entity IO handler that is able to export the file.
      ///
      /// \note The same rules as for 
      ///  FindEntityImportHandler(const String&, const String&) apply here.
      EntityIOHandlerP FindEntityExportHandler(const String& filename,
                                               const String& format="auto");
          
    
      /// \name Alignment/Sequence IO
      //@{
      /// \brief get sequence io handler that is able to import the given file.
      /// \sa FindEntityImportHandler(filename)       
      SequenceIOHandlerPtr FindAlignmentImportHandler(const String& filename,
                                                       const String& format="auto");
                                                       
      SequenceIOHandlerPtr FindAlignmentExportHandler(const String& filename,
                                                       const String& format="auto");                                                   
      
      SurfaceIOHandlerPtr FindSurfaceImportHandler(const String& filename,
                                                   const String& format="auto");
      //@}
      /// \brief register entity io handler factory
      /// \sa adding_io_handler
      void RegisterFactory(const EntityIOHandlerFactoryBaseP&);
      /// \brief register aligment io handler factory
      /// \sa adding_io_handler
      void RegisterFactory(const SequenceIOHandlerFactoryBasePtr&);  
      /// \brief register surface io handler factory
      /// \sa adding_io_handler
      void RegisterFactory(const SurfaceIOHandlerFactoryBasePtr&);  
    
      /// \brief Get a list with all available EntityHandler
      const EntityIOHFList& GetAvailableEntityHandler() const;
    
      /// \brief Get a list with all available AlignmentHandler
      const AlignmentIOFList& GetAvailableAlignmentHandler() const;
    
      /// \brief Get a list with all available SurfaceHandler
      const SurfaceIOFList& GetAvailableSurfaceHandler() const;
    
    #if OST_IMG_ENABLED
      /// \name Image/Map IO
      //@{
      /// \brief register map io handle factory
      /// \sa adding_io_handler
      void RegisterFactory(const MapIOHandlerFactoryBasePtr&);  
    
      MapIOHandlerPtr FindMapImportHandlerFile(const boost::filesystem::path& loc,
                                               const ImageFormatBase& format);
    
      MapIOHandlerPtr FindMapImportHandlerStream(std::istream& stream,
                                                 const ImageFormatBase& format);
    
      MapIOHandlerPtr FindMapExportHandlerFile(const boost::filesystem::path& loc,
                                               const ImageFormatBase& format);
    
      MapIOHandlerPtr FindMapExportHandlerStream(std::istream& stream,
                                                 const ImageFormatBase& format);
    
      const MapIOFList& GetAvailableMapHandler() const;
      //@}
    #endif
    
      // singleton interface
      static IOManager& Instance();
    
    private:
      IOManager();
      IOManager(const IOManager&) {}
      IOManager& operator=(const IOManager&) {return *this;}
    
      EntityIOHFList entity_iohf_list_;
      AlignmentIOFList alignment_io_list_;
      SurfaceIOFList surface_io_list_;
    
    #if OST_IMG_ENABLED
      MapIOFList map_io_list_;
    #endif
    };
    
    
    
    }}
    
    #endif