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backbone_trace.hh
marco authored
git-svn-id: https://dng.biozentrum.unibas.ch/svn/openstructure/trunk@1742 5a81b35b-ba03-0410-adc8-b2c5c5119f08
backbone_trace.hh 3.64 KiB
//------------------------------------------------------------------------------
// This file is part of the OpenStructure project <www.openstructure.org>
//
// Copyright (C) 2008-2010 by the OpenStructure authors
//
// This library is free software; you can redistribute it and/or modify it under
// the terms of the GNU Lesser General Public License as published by the Free
// Software Foundation; either version 3.0 of the License, or (at your option)
// any later version.
// This library is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
// FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License for more
// details.
//
// You should have received a copy of the GNU Lesser General Public License
// along with this library; if not, write to the Free Software Foundation, Inc.,
// 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA
//------------------------------------------------------------------------------
#ifndef OST_GFX_IMPL_BACKBONE_TRACE_HH
#define OST_GFX_IMPL_BACKBONE_TRACE_HH
/*
Authors: Ansgar Philippsen, Marco Biasini
*/
#include <ost/mol/mol.hh>
#include <ost/gfx/module_config.hh>
#include <ost/gfx/impl/entity_detail.hh>
namespace ost { namespace gfx { namespace impl {
class BackboneTraceBuilder;
/// \internal
/// \brief a smoothed backbone trace
///
/// This class can be used to calculate a smoothed backbone trace for an
/// entity view.
class DLLEXPORT_OST_GFX BackboneTrace {
public:
BackboneTrace(const mol::EntityView& ent);
BackboneTrace();
int GetListCount() const;
const NodeEntryList& GetList(int index) const;
NodeEntryList& GetList(int index);
void SetView(const mol::EntityView& ent);
// used internally
void AddNodeList(const NodeEntryList& entries);
void Rebuild();
private:
mol::EntityView view_;
NodeEntryListList node_list_list_;
};
/// \internal
/// \brief a subset of a node list
class DLLEXPORT_OST_GFX NodeListSubset {
public:
friend class TraceSubset;
NodeListSubset(BackboneTrace& trace, int index);
int GetSize() const
{
return indices_.size();
}
int AtStart() const
{
return at_start_;
}
int AtEnd() const
{
return at_end_;
}
const NodeEntry& operator [](int index) const
{
assert(index>=0 && index<static_cast<int>(indices_.size()));
return trace_.GetList(list_index_)[indices_[index]];
}
NodeEntry& operator [](int index)
{
assert(index>=0 && index<static_cast<int>(indices_.size()));
return trace_.GetList(list_index_)[indices_[index]];
}
NodeListSubset& operator=(const NodeListSubset& rhs);
private:
BackboneTrace& trace_;
int list_index_;
protected:
std::vector<int> indices_;
int at_start_;
int at_end_;
};
/// \brief a subset of the trace
class DLLEXPORT_OST_GFX TraceSubset {
public:
TraceSubset(BackboneTrace& trace, const mol::EntityView& view, int n);
TraceSubset(BackboneTrace& trace, int n);
const NodeListSubset& operator[](int index) const
{
return lists_[index];
}
NodeListSubset& operator[](int index)
{
return lists_[index];
}
int GetSize() const
{
return lists_.size();
}
void SetOvershoot(int n) { overshoot_=n; }
int GetOvershoot() const { return overshoot_; }
TraceSubset& operator=(const TraceSubset& rhs);
void Update(const mol::EntityView& view);
private:
void NodeListStart(NodeListSubset& nl, int c);
void NodeListEnd(NodeListSubset& nl, int c, int s);
BackboneTrace& trace_;
std::vector<NodeListSubset> lists_;
int overshoot_;
};
}}}
#endif