From 0de2b6723ede7a645da1dea74699cf49861a4988 Mon Sep 17 00:00:00 2001
From: Gabriel Studer <gabriel.studer@unibas.ch>
Date: Fri, 12 May 2023 00:04:59 +0200
Subject: [PATCH] USalign: correclty set option

This should have zero effect but you never know...
---
 modules/bindings/src/wrap_tmalign.cc | 3 +++
 1 file changed, 3 insertions(+)

diff --git a/modules/bindings/src/wrap_tmalign.cc b/modules/bindings/src/wrap_tmalign.cc
index 78c372dba..fbf6544b4 100644
--- a/modules/bindings/src/wrap_tmalign.cc
+++ b/modules/bindings/src/wrap_tmalign.cc
@@ -554,6 +554,9 @@ MMAlignResult WrappedMMAlign(const std::vector<geom::Vec3List>& pos_one,
   vector<string> resi_vec1;  // residue index for chain1
   vector<string> resi_vec2;  // residue index for chain2
 
+  // hardcode some variable values
+  ter_opt = 0;
+
 
   // COMMENT OUT MMALIGN STRUCTURE PARSING WHICH IS FILE BASED
   ////////////////////////////////////////////////////////////
-- 
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