From 173c58172df4ba6bffafce5a3e130b10df063c92 Mon Sep 17 00:00:00 2001
From: Martino Bertoni <martino.bertoni@unibas.ch>
Date: Wed, 4 Mar 2015 18:09:24 +0100
Subject: [PATCH] new enviroment DSSP bin name included when locating DSSP
---
modules/bindings/pymod/dssp.py | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/modules/bindings/pymod/dssp.py b/modules/bindings/pymod/dssp.py
index fe33b33f1..7fe206d0a 100644
--- a/modules/bindings/pymod/dssp.py
+++ b/modules/bindings/pymod/dssp.py
@@ -48,7 +48,7 @@ def _ExecuteDSSP(path, dssp_bin, temp_dir=None):
# use of mktemp is a safty problem (use mkstemp and provide file handle to
# subsequent process
temp_dssp_path=tempfile.mktemp(suffix=".out",prefix="dssp", dir=temp_dir)
- dssp_abs_path=settings.Locate(['dsspcmbi','dssp'], env_name='DSSP_EXECUTABLE',
+ dssp_abs_path=settings.Locate(['dsspcmbi','dssp','mkdssp'], env_name='DSSP_EXECUTABLE',
explicit_file_name=dssp_bin)
if os.path.isdir(dssp_abs_path):
raise RuntimeError('"%s" is a directory. Specify path to DSSP binary' % dssp_abs_path)
--
GitLab