From 2135623859a064541b8cf5f4418c43b6a07d6e40 Mon Sep 17 00:00:00 2001 From: tobias <tobias@5a81b35b-ba03-0410-adc8-b2c5c5119f08> Date: Fri, 28 May 2010 15:12:29 +0000 Subject: [PATCH] fix selection problem in msms git-svn-id: https://dng.biozentrum.unibas.ch/svn/openstructure/trunk@2301 5a81b35b-ba03-0410-adc8-b2c5c5119f08 --- modules/bindings/pymod/msms.py | 10 ++++++++-- 1 file changed, 8 insertions(+), 2 deletions(-) diff --git a/modules/bindings/pymod/msms.py b/modules/bindings/pymod/msms.py index a7a3dd13e..7f9e089ff 100644 --- a/modules/bindings/pymod/msms.py +++ b/modules/bindings/pymod/msms.py @@ -144,7 +144,10 @@ def CalculateSurfaceArea(entity, density=1.0, radius=1.5, all_surf=False, # parse selection if no_hydrogens: - selection+=" and ele!=H" + if selection=="": + selection="ele!=H" + else: + selection+=" and ele!=H" # setup files for msms (msms_data_dir, msms_data_file)=_SetupFiles(entity, selection) @@ -215,7 +218,10 @@ def CalculateSurface(entity, density=1.0, radius=1.5, all_surf=False, # parse selection if no_hydrogens: - selection+=" and ele!=H" + if selection=="": + selection="ele!=H" + else: + selection+=" and ele!=H" # setup files for msms -- GitLab