From 35bbadb522627382aa82e7074f537abc20eaffbd Mon Sep 17 00:00:00 2001
From: Stefan Bienert <stefan.bienert@unibas.ch>
Date: Thu, 9 Mar 2017 10:43:19 +0100
Subject: [PATCH] Testing
---
modules/bindings/tests/test_hhblits.py | 10 ++++++++++
1 file changed, 10 insertions(+)
diff --git a/modules/bindings/tests/test_hhblits.py b/modules/bindings/tests/test_hhblits.py
index c396528b8..4bc61f455 100644
--- a/modules/bindings/tests/test_hhblits.py
+++ b/modules/bindings/tests/test_hhblits.py
@@ -115,6 +115,16 @@ class TestHHblitsBindings(unittest.TestCase):
'TSKYR')
self.hh = hhblits.HHblits(query_seq, self.hhroot)
a3m = self.hh.BuildQueryMSA('testfiles/hhblitsdb/hhblitsdb')
+ print "A3M"
+ with open(a3m) as fh:
+ for line in fh:
+ line = line.split()
+ print line
+ print "TESTFILE"
+ with open("testfiles/testali.a3m") as fh:
+ for line in fh:
+ line = line.split()
+ print line
self.assertTrue(filecmp.cmp(a3m, "testfiles/testali.a3m"))
def testA3mToProfileFileName(self):
--
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