From 3783c5ee8299610476adc602dce79a5742e08e15 Mon Sep 17 00:00:00 2001
From: Gerardo Tauriello <gerardo.tauriello@unibas.ch>
Date: Thu, 21 Sep 2017 14:49:01 +0200
Subject: [PATCH] Doc update - clarify extra-residues in QS-lddt structures
---
modules/mol/alg/pymod/qsscoring.py | 5 +++--
1 file changed, 3 insertions(+), 2 deletions(-)
diff --git a/modules/mol/alg/pymod/qsscoring.py b/modules/mol/alg/pymod/qsscoring.py
index 2d0bac6de..42c073f41 100644
--- a/modules/mol/alg/pymod/qsscoring.py
+++ b/modules/mol/alg/pymod/qsscoring.py
@@ -467,7 +467,8 @@ class QSscorer:
Since, the lDDT computation requires a single chain with mapped residue
numbering, all chains are appended into a single chain X with unique residue
numbers according to the column-index in the alignment. The alignments are
- in the same order as they appear in :attr:`alignments`.
+ in the same order as they appear in :attr:`alignments`. Additional residues
+ are appended at the end of the chain with unique residue numbers.
:getter: Computed on first use (cached)
:type: :class:`~ost.mol.EntityHandle`
@@ -481,7 +482,7 @@ class QSscorer:
"""The reference entity used for lDDT scoring (:attr:`lddt_score`).
This is a single chain X with residue numbers matching ones in
- :attr:`lddt_mdl`.
+ :attr:`lddt_mdl` where aligned and unique numbers for additional residues.
:getter: Computed on first use (cached)
:type: :class:`~ost.mol.EntityHandle`
--
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