From 3efe637c81f70aadeca2d4c6af877b9ab06f0996 Mon Sep 17 00:00:00 2001
From: Xavier Robin <xavier.robin@unibas.ch>
Date: Tue, 23 Jul 2024 11:35:14 +0200
Subject: [PATCH] test: hide warnings
---
modules/conop/src/chemdict_tool.cc | 3 +++
modules/conop/tests/test_complib.py | 2 +-
2 files changed, 4 insertions(+), 1 deletion(-)
diff --git a/modules/conop/src/chemdict_tool.cc b/modules/conop/src/chemdict_tool.cc
index 94668818b..97d9c45f2 100644
--- a/modules/conop/src/chemdict_tool.cc
+++ b/modules/conop/src/chemdict_tool.cc
@@ -45,6 +45,7 @@ void PrintUsage()
std::cout << " -i - ignore compounds reserved by the PDB (01-99, DRG, INH, LIG)" << std::endl;
std::cout << " -o - ignore obsolete compounds" << std::endl;
std::cout << " -v - be more verbose" << std::endl;
+ std::cout << " -q - be more quiet (last of -v or -q is applied)" << std::endl;
}
int main(int argc, char const *argv[])
@@ -74,6 +75,8 @@ int main(int argc, char const *argv[])
ignore_obsolete=true;
} else if (param=="-v") {
Logger::Instance().PushVerbosityLevel(4);
+ } else if (param=="-q") {
+ Logger::Instance().PushVerbosityLevel(0);
} else {
PrintUsage();
return 0;
diff --git a/modules/conop/tests/test_complib.py b/modules/conop/tests/test_complib.py
index 326db68f1..5ffcb5af4 100644
--- a/modules/conop/tests/test_complib.py
+++ b/modules/conop/tests/test_complib.py
@@ -11,7 +11,7 @@ def CreateComplib(compound_dict_path, chemlib_out_path, extra_args=None):
chemdict_tool_path = os.path.join(prefix_path, "bin", "chemdict_tool")
if not os.path.exists(chemdict_tool_path):
raise RuntimeError("Expect chemdict_tool:", chemdict_tool_path)
- cmd = [chemdict_tool_path, "create", compound_dict_path, chemlib_out_path]
+ cmd = [chemdict_tool_path, "create", compound_dict_path, chemlib_out_path, "-q"]
if extra_args:
cmd += extra_args
subprocess.run(cmd, stdout=subprocess.PIPE)
--
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