From 464d16cc69511038d2c96f25ce27ce5537a40f8e Mon Sep 17 00:00:00 2001
From: Xavier Robin <xavier.robin@unibas.ch>
Date: Fri, 12 Jul 2024 11:01:02 +0200
Subject: [PATCH] fix: info level logging displays the correct data
All counts were reset to 0 by a call to NextMolecule(). Now we are
displaying the data straight from the entity. Assumes an empty
entity at the start.
---
modules/io/src/mol/sdf_reader.cc | 8 +++++---
1 file changed, 5 insertions(+), 3 deletions(-)
diff --git a/modules/io/src/mol/sdf_reader.cc b/modules/io/src/mol/sdf_reader.cc
index 76c7091a2..70ee382b1 100644
--- a/modules/io/src/mol/sdf_reader.cc
+++ b/modules/io/src/mol/sdf_reader.cc
@@ -113,9 +113,11 @@ void SDFReader::Import(mol::EntityHandle& ent)
ProcessV3000Line(line, ent, editor);
}
}
-
- LOG_INFO("imported " << chain_count_ << " chains, " << residue_count_
- << " residues, " << atom_count_ << " atoms");
+ LOG_INFO("imported "
+ << ent.GetChainCount() << " chains, "
+ << ent.GetResidueCount() << " residues, "
+ << ent.GetAtomCount() << " atoms and "
+ << ent.GetBondCount() << " bonds");
}
void SDFReader::ClearState(const boost::filesystem::path& loc)
--
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