From 4738ec02e689befa67628dbe0f8db223c33ef9fe Mon Sep 17 00:00:00 2001
From: marco <marco@5a81b35b-ba03-0410-adc8-b2c5c5119f08>
Date: Tue, 8 Jun 2010 14:30:48 +0000
Subject: [PATCH] added file describing supported file formats (incomplete)

git-svn-id: https://dng.biozentrum.unibas.ch/svn/openstructure/trunk@2360 5a81b35b-ba03-0410-adc8-b2c5c5119f08
---
 modules/io/doc/formats.rst | 81 ++++++++++++++++++++++++++++++++++++++
 1 file changed, 81 insertions(+)
 create mode 100644 modules/io/doc/formats.rst

diff --git a/modules/io/doc/formats.rst b/modules/io/doc/formats.rst
new file mode 100644
index 000000000..ceef7e5f2
--- /dev/null
+++ b/modules/io/doc/formats.rst
@@ -0,0 +1,81 @@
+Supported File Formats
+================================================================================
+
+Structure File Formats
+--------------------------------------------------------------------------------
+
+The following file formats are supported by :func:`~ost.io.LoadEntity`. 
+
+
+  
+PDB - Brookhaven PDB File
+^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
+Fine grained control over PDB file import is available via the 
+:func:`~ost.io.LoadPDB` function. The PDB importer support loading gzipped PDB 
+files. gzipped PDB files are detected by the .gz file extension.
+
+*Recognized File Extensions*
+  ent, pdb, ent.gz, pdb.gz
+
+*Format Name*
+  pdb
+
+PQR
+^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
+
+*Recognized File Extensions*
+  pqr
+
+*Format Name*
+  pqr
+
+CRD - CARD format file used by CHARMM
+^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
+
+*Recognized File Extensions*
+  crd
+  
+SDF
+^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
+
+*Recognized File Extensions*
+  sdf
+  
+Sequence File Formats
+--------------------------------------------------------------------------------
+
+FASTA
+^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
+
+*Recognized File Extensions*
+  fasta, fna, fas, fa, fsa
+  
+*Format Name*
+  fasta
+
+ClustalW
+^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
+
+*Recognized File Extensions*
+  aln
+  
+*Format Name*
+  clustal
+
+Promod
+^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
+
+*Recognized File Extensions*
+  ali
+  
+*Format Name*
+  promod
+
+PIR
+^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
+
+*Recognized File Extensions*
+  pir
+  
+*Format Name*
+  pir
\ No newline at end of file
-- 
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