From 4f691c8e8d947830b7b3e6908a221d2671725a4f Mon Sep 17 00:00:00 2001
From: Gabriel Studer <gabriel.studer@unibas.ch>
Date: Wed, 13 Apr 2022 22:26:01 +0200
Subject: [PATCH] change local_contact_prop naming scheme
---
modules/mol/alg/pymod/lddt.py | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/modules/mol/alg/pymod/lddt.py b/modules/mol/alg/pymod/lddt.py
index 70b9ca9b1..d7d9caf1a 100644
--- a/modules/mol/alg/pymod/lddt.py
+++ b/modules/mol/alg/pymod/lddt.py
@@ -315,7 +315,7 @@ class lDDTScorer:
assigned as generic int property.
Excected contacts will be set as
<local_contact_prop>_exp, conserved contacts
- as <local_contact_prop>_conserved. Values
+ as <local_contact_prop>_cons. Values
are summed over all thresholds.
:param local_contact_prop: :class:`str`
:param chain_mapping: Mapping of model chains (key) onto target chains
@@ -506,7 +506,7 @@ class lDDTScorer:
if local_contact_prop:
residues = model.residues
exp_prop = local_contact_prop + "_exp"
- conserved_prop = local_contact_prop + "_conserved"
+ conserved_prop = local_contact_prop + "_cons"
for idx in res_indices:
residues[idx].SetIntProp(exp_prop, n_thresh * per_res_exp[idx])
residues[idx].SetIntProp(conserved_prop,
--
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