From 58f5d1575554b8781d280e160e3fd717cb9b9fbd Mon Sep 17 00:00:00 2001
From: Gabriel Studer <gabriel.studer@unibas.ch>
Date: Thu, 6 Feb 2020 18:03:36 +0100
Subject: [PATCH] hook up hmm algorithms in build system

---
 modules/seq/alg/src/CMakeLists.txt | 4 ++++
 1 file changed, 4 insertions(+)

diff --git a/modules/seq/alg/src/CMakeLists.txt b/modules/seq/alg/src/CMakeLists.txt
index ea32bbd6c..f97ba489e 100644
--- a/modules/seq/alg/src/CMakeLists.txt
+++ b/modules/seq/alg/src/CMakeLists.txt
@@ -19,6 +19,8 @@ subst_weight_matrix.hh
 variance_map.hh
 data/default_contact_weight_matrix.hh
 data/default_pair_subst_weight_matrix.hh
+hmm_pseudo_counts.hh
+hmm_score.hh
 )
 
 set(OST_SEQ_ALG_SOURCES
@@ -38,6 +40,8 @@ sequence_identity.cc
 sequence_similarity.cc
 subst_weight_matrix.cc
 variance_map.cc
+hmm_pseudo_counts.cc
+hmm_score.cc
 )
 
 module(NAME seq_alg HEADER_OUTPUT_DIR ost/seq/alg SOURCES ${OST_SEQ_ALG_SOURCES}
-- 
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