From 68a43c51a089102e4e25ef6487c106db9b5196a5 Mon Sep 17 00:00:00 2001
From: Gabriel Studer <gabriel.studer@unibas.ch>
Date: Mon, 18 May 2015 09:37:33 +0200
Subject: [PATCH] Make Get Min/Max Weight functions in substitution matrix
const and export them to Python
---
modules/seq/alg/pymod/wrap_seq_alg.cc | 2 ++
modules/seq/alg/src/subst_weight_matrix.hh | 4 ++--
2 files changed, 4 insertions(+), 2 deletions(-)
diff --git a/modules/seq/alg/pymod/wrap_seq_alg.cc b/modules/seq/alg/pymod/wrap_seq_alg.cc
index 6597e459e..37d1609b7 100644
--- a/modules/seq/alg/pymod/wrap_seq_alg.cc
+++ b/modules/seq/alg/pymod/wrap_seq_alg.cc
@@ -61,6 +61,8 @@ BOOST_PYTHON_MODULE(_ost_seq_alg)
class_<SubstWeightMatrix, SubstWeightMatrixPtr>("SubstWeightMatrix", init<>())
.def("GetWeight", &SubstWeightMatrix::GetWeight)
.def("SetWeight", &SubstWeightMatrix::SetWeight)
+ .def("GetMinWeight", &SubstWeightMatrix::GetMinWeight)
+ .def("GetMaxWeight", &SubstWeightMatrix::GetMaxWeight)
;
def("MergePairwiseAlignments", &MergePairwiseAlignments);
diff --git a/modules/seq/alg/src/subst_weight_matrix.hh b/modules/seq/alg/src/subst_weight_matrix.hh
index 6cede33bd..7ccabc68f 100644
--- a/modules/seq/alg/src/subst_weight_matrix.hh
+++ b/modules/seq/alg/src/subst_weight_matrix.hh
@@ -65,10 +65,10 @@ public:
}
/// \brief Get the minimal substitution weight of the matrix
- WeightType GetMinWeight() { return min_weight_; }
+ WeightType GetMinWeight() const { return min_weight_; }
/// \brief Get the maximal substitution weight of the matrix
- WeightType GetMaxWeight() { return max_weight_; }
+ WeightType GetMaxWeight() const { return max_weight_; }
/// \brief Set the substitution weight between two amino acids
///
--
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