diff --git a/modules/bindings/pymod/blast.py b/modules/bindings/pymod/blast.py index 4ab48e3014b6aa264cd1ad40a06fd81529ff90b8..9fdc739cf56bf28bd902b9ddc63194c315def01b 100644 --- a/modules/bindings/pymod/blast.py +++ b/modules/bindings/pymod/blast.py @@ -251,7 +251,10 @@ def Blast(query, database, gap_open=11, gap_ext=1, matrix='BLOSUM62', else: complexity_opt='-seg' - complexity_arg='yes' if filter_low_complexity==True else 'no' + if filter_low_complexity==True: + complexity_arg='yes' + else: + complexity_arg='no' args=[blast_exe, '-db', database, '-matrix', matrix, '-gapopen', str(gap_open), '-gapextend', str(gap_ext), '-outfmt', '5', complexity_opt, complexity_arg ]