From 7924e7b6df89c09b40d6ad3f59c33a90fd3beca1 Mon Sep 17 00:00:00 2001
From: Gerardo Tauriello <gerardo.tauriello@unibas.ch>
Date: Tue, 23 Oct 2018 11:19:08 +0200
Subject: [PATCH] Remove io dependency from mol/alg source code.
---
modules/mol/alg/src/find_membrane.hh | 28 ++++++++++++++++++---
modules/mol/alg/src/local_dist_diff_test.cc | 1 -
2 files changed, 24 insertions(+), 5 deletions(-)
diff --git a/modules/mol/alg/src/find_membrane.hh b/modules/mol/alg/src/find_membrane.hh
index 962ea68fc..c2e00d87a 100644
--- a/modules/mol/alg/src/find_membrane.hh
+++ b/modules/mol/alg/src/find_membrane.hh
@@ -1,10 +1,28 @@
-#include <ost/mol/mol.hh>
+//------------------------------------------------------------------------------
+// This file is part of the OpenStructure project <www.openstructure.org>
+//
+// Copyright (C) 2008-2011 by the OpenStructure authors
+//
+// This library is free software; you can redistribute it and/or modify it under
+// the terms of the GNU Lesser General Public License as published by the Free
+// Software Foundation; either version 3.0 of the License, or (at your option)
+// any later version.
+// This library is distributed in the hope that it will be useful, but WITHOUT
+// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
+// FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License for more
+// details.
+//
+// You should have received a copy of the GNU Lesser General Public License
+// along with this library; if not, write to the Free Software Foundation, Inc.,
+// 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA
+//------------------------------------------------------------------------------
+#ifndef OST_MOL_ALG_FIND_MEMBRANE_H
+#define OST_MOL_ALG_FIND_MEMBRANE_H
+#include <ost/mol/mol.hh>
#include <ost/geom/geom.hh>
-#include <ost/io/binary_data_source.hh>
-#include <ost/io/binary_data_sink.hh>
-namespace ost { namespace mol{ namespace alg{
+namespace ost { namespace mol { namespace alg {
struct FindMemParam{
FindMemParam() { }
@@ -29,3 +47,5 @@ FindMemParam FindMembrane(ost::mol::EntityView& ent,
bool fast);
}}} // ns
+
+#endif
\ No newline at end of file
diff --git a/modules/mol/alg/src/local_dist_diff_test.cc b/modules/mol/alg/src/local_dist_diff_test.cc
index de6ea31e6..c52bf1156 100644
--- a/modules/mol/alg/src/local_dist_diff_test.cc
+++ b/modules/mol/alg/src/local_dist_diff_test.cc
@@ -7,7 +7,6 @@
#include <boost/concept_check.hpp>
#include <boost/filesystem/convenience.hpp>
#include <ost/mol/alg/consistency_checks.hh>
-#include <ost/io/stereochemical_params_reader.hh>
namespace ost { namespace mol { namespace alg {
--
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