From 8199b430a74a2887beac2f1392999f9a4ba591de Mon Sep 17 00:00:00 2001
From: Gabriel Studer <gabriel.studer@unibas.ch>
Date: Tue, 20 Sep 2022 10:37:56 +0200
Subject: [PATCH] chain mapping: add flat mapping to MappingResult.JSONSummary
---
modules/mol/alg/pymod/chain_mapping.py | 1 +
1 file changed, 1 insertion(+)
diff --git a/modules/mol/alg/pymod/chain_mapping.py b/modules/mol/alg/pymod/chain_mapping.py
index 8fa4b8a27..e45714173 100644
--- a/modules/mol/alg/pymod/chain_mapping.py
+++ b/modules/mol/alg/pymod/chain_mapping.py
@@ -114,6 +114,7 @@ class MappingResult:
json_dict = dict()
json_dict["chem_groups"] = self.chem_groups
json_dict["mapping"] = self.mapping
+ json_dict["flat_mapping"] = self.GetFlatMapping()
json_dict["alns"] = list()
for aln in self.alns.values():
trg_seq = aln.GetSequence(0)
--
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