From 8b548c335341f3eaed21f9309f934db896ee0313 Mon Sep 17 00:00:00 2001
From: Marco Biasini <marco.biasini@unibas.ch>
Date: Wed, 13 Jun 2012 17:53:43 +0200
Subject: [PATCH] fix BZDNG-310
---
modules/seq/base/src/alignment_handle.cc | 8 ++++++--
1 file changed, 6 insertions(+), 2 deletions(-)
diff --git a/modules/seq/base/src/alignment_handle.cc b/modules/seq/base/src/alignment_handle.cc
index 47a4fd0dd..89e1391c0 100644
--- a/modules/seq/base/src/alignment_handle.cc
+++ b/modules/seq/base/src/alignment_handle.cc
@@ -66,10 +66,14 @@ int AlignmentHandle::GetResidueIndex(int seq_index, int pos) const
void AlignmentHandle::AddSequence(const ConstSequenceHandle& sequence)
{
this->CheckValidity();
- if (!sequence.IsValid() || (impl_->GetCount()>0 &&
- impl_->GetSequence(0)->GetLength()!=sequence.GetLength())) {
+ if (!sequence.IsValid()) {
throw InvalidSequence();
}
+ if (!(impl_->GetCount()>0 &&
+ impl_->GetSequence(0)->GetLength()!=sequence.GetLength())) {
+ throw std::runtime_error("sequence doesn't have the same length as the "
+ "alignment");
+ }
return impl_->AddSequence(sequence.Impl());
}
--
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