From 94b6731841e7f481e8a0be8fe7e8be6f289c6151 Mon Sep 17 00:00:00 2001
From: Marco Biasini <marco.biasini@unibas.ch>
Date: Mon, 22 Aug 2011 16:40:21 +0200
Subject: [PATCH] make AlignToSEQRES usable for polynucleotides
---
modules/seq/alg/pymod/__init__.py | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/modules/seq/alg/pymod/__init__.py b/modules/seq/alg/pymod/__init__.py
index 9907b011f..bd108a603 100644
--- a/modules/seq/alg/pymod/__init__.py
+++ b/modules/seq/alg/pymod/__init__.py
@@ -88,7 +88,7 @@ def AlignToSEQRES(chain, seqres, try_resnum_first=False, validate=True):
from ost import seq
from ost import mol
from ost import LogWarning
- view=chain.Select('ligand=false and peptide=true')
+ view=chain
residues=view.residues
if len(residues)==0:
return seq.CreateAlignment()
--
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