From 9a659bca1e6374aff1427b9479de051bbabebdc3 Mon Sep 17 00:00:00 2001
From: stefan <stefan@5a81b35b-ba03-0410-adc8-b2c5c5119f08>
Date: Fri, 28 May 2010 15:40:44 +0000
Subject: [PATCH] New SequenceViewer, colors for Aligments
git-svn-id: https://dng.biozentrum.unibas.ch/svn/openstructure/trunk@2302 5a81b35b-ba03-0410-adc8-b2c5c5119f08
---
modules/gui/src/CMakeLists.txt | 3 +
.../src/sequence/align_properties_painter.cc | 78 +++++++++++++++++++
.../src/sequence/align_properties_painter.hh | 46 +++++++++++
.../gui/src/sequence/sequence_view_object.cc | 3 +
4 files changed, 130 insertions(+)
create mode 100644 modules/gui/src/sequence/align_properties_painter.cc
create mode 100644 modules/gui/src/sequence/align_properties_painter.hh
diff --git a/modules/gui/src/CMakeLists.txt b/modules/gui/src/CMakeLists.txt
index 36b468e63..decd467a8 100644
--- a/modules/gui/src/CMakeLists.txt
+++ b/modules/gui/src/CMakeLists.txt
@@ -21,6 +21,7 @@ sequence_search_bar.hh
)
set(OST_GUI_SEQUENCE_VIEW_HEADERS
+align_properties_painter.hh
base_row.hh
background_painter.hh
painter.hh
@@ -214,6 +215,7 @@ sequence_viewer/sequence_viewer_base.cc
sequence_viewer/sequence_viewer.cc
sequence_viewer/sequence_scene.cc
sequence_viewer/sequence_search_bar.cc
+sequence/align_properties_painter.cc
sequence/base_row.cc
sequence/background_painter.cc
sequence/secstr_row.cc
@@ -347,6 +349,7 @@ sequence_viewer/sequence_viewer_base.hh
sequence_viewer/sequence_viewer.hh
sequence_viewer/sequence_scene.hh
sequence_viewer/sequence_search_bar.hh
+sequence/align_properties_painter.hh
sequence/background_painter.hh
sequence/base_row.hh
sequence/painter.hh
diff --git a/modules/gui/src/sequence/align_properties_painter.cc b/modules/gui/src/sequence/align_properties_painter.cc
new file mode 100644
index 000000000..795e8febd
--- /dev/null
+++ b/modules/gui/src/sequence/align_properties_painter.cc
@@ -0,0 +1,78 @@
+//------------------------------------------------------------------------------
+// This file is part of the OpenStructure project <www.openstructure.org>
+//
+// Copyright (C) 2008-2010 by the OpenStructure authors
+//
+// This library is free software; you can redistribute it and/or modify it under
+// the terms of the GNU Lesser General Public License as published by the Free
+// Software Foundation; either version 3.0 of the License, or (at your option)
+// any later version.
+// This library is distributed in the hope that it will be useful, but WITHOUT
+// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
+// FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License for more
+// details.
+//
+// You should have received a copy of the GNU Lesser General Public License
+// along with this library; if not, write to the Free Software Foundation, Inc.,
+// 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA
+//------------------------------------------------------------------------------
+
+/*
+ Author: Stefan Scheuber
+ */
+
+
+#include <QtGui>
+
+#include "align_properties_painter.hh"
+
+namespace ost { namespace gui {
+
+namespace {
+
+QMap<QString,QColor> GetColorMap(){
+ QMap<QString,QColor> map;
+ map["G"]=QColor(Qt::gray);
+ map["A"]=QColor(Qt::gray);
+ map["V"]=QColor(Qt::gray);
+ map["L"]=QColor(Qt::gray);
+ map["I"]=QColor(Qt::gray);
+ map["F"]=QColor(255,165,0);
+ map["Y"]=QColor(255,165,0);
+ map["W"]=QColor(255,165,0);
+ map["C"]=QColor(Qt::yellow);
+ map["M"]=QColor(Qt::yellow);
+ map["S"]=QColor(Qt::green);
+ map["T"]=QColor(Qt::green);
+ map["K"]=QColor(Qt::red);
+ map["R"]=QColor(Qt::red);
+ map["H"]=QColor(Qt::red);
+ map["D"]=QColor(Qt::blue);
+ map["E"]=QColor(Qt::blue);
+ map["N"]=QColor(Qt::blue);
+ map["Q"]=QColor(Qt::blue);
+ map["P"]=QColor(Qt::magenta);
+ return map;
+}
+
+}
+
+QMap<QString,QColor> AlignPropertiesPainter::color_map_ = GetColorMap();
+
+
+AlignPropertiesPainter::AlignPropertiesPainter(QObject* parent)
+ : Painter(parent)
+{}
+
+void AlignPropertiesPainter::Paint(QPainter* painter, const QStyleOptionViewItem& option, const QModelIndex& index){
+ painter->save();
+ if (index.column()>0){
+ QString text = index.data(Qt::DisplayRole).toString();
+ if(color_map_.contains(text)){
+ painter->fillRect(option.rect, color_map_[text]);
+ }
+ }
+ painter->restore();
+}
+
+}}
diff --git a/modules/gui/src/sequence/align_properties_painter.hh b/modules/gui/src/sequence/align_properties_painter.hh
new file mode 100644
index 000000000..d33331cc6
--- /dev/null
+++ b/modules/gui/src/sequence/align_properties_painter.hh
@@ -0,0 +1,46 @@
+//------------------------------------------------------------------------------
+// This file is part of the OpenStructure project <www.openstructure.org>
+//
+// Copyright (C) 2008-2010 by the OpenStructure authors
+//
+// This library is free software; you can redistribute it and/or modify it under
+// the terms of the GNU Lesser General Public License as published by the Free
+// Software Foundation; either version 3.0 of the License, or (at your option)
+// any later version.
+// This library is distributed in the hope that it will be useful, but WITHOUT
+// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
+// FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License for more
+// details.
+//
+// You should have received a copy of the GNU Lesser General Public License
+// along with this library; if not, write to the Free Software Foundation, Inc.,
+// 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA
+//------------------------------------------------------------------------------
+#ifndef OST_SEQUENCE_VIEWER_ALIGN_PROPERTIES_PAINTER
+#define OST_SEQUENCE_VIEWER_ALIGN_PROPERTIES_PAINTER
+
+/*
+ Author: Stefan Scheuber
+ */
+
+#include <QObject>
+
+#include "painter.hh"
+
+namespace ost { namespace gui {
+
+
+
+class AlignPropertiesPainter : public Painter
+{
+ Q_OBJECT
+public:
+ AlignPropertiesPainter(QObject* parent = 0);
+ void Paint(QPainter *painter, const QStyleOptionViewItem &option, const QModelIndex &index);
+private:
+ static QMap<QString,QColor> color_map_;
+};
+
+}}
+
+#endif
diff --git a/modules/gui/src/sequence/sequence_view_object.cc b/modules/gui/src/sequence/sequence_view_object.cc
index b5a44c067..daf0bbf65 100644
--- a/modules/gui/src/sequence/sequence_view_object.cc
+++ b/modules/gui/src/sequence/sequence_view_object.cc
@@ -30,6 +30,7 @@
#include "sequence_row.hh"
#include "secstr_row.hh"
+#include "align_properties_painter.hh"
#include "painter.hh"
#include "background_painter.hh"
#include "seq_secstr_painter.hh"
@@ -82,6 +83,8 @@ void SequenceViewObject::AddSequence(seq::SequenceHandle& sequence, const QStrin
SequenceRow* new_row = new SequenceRow(name, sequence, this);
Painter* p = new BackgroundPainter(this);
new_row->InsertPainter(p);
+ p = new AlignPropertiesPainter(this);
+ new_row->InsertPainter(p);
p = new SeqSelectionPainter(this);
new_row->InsertPainter(p);
p = new SeqTextPainter(this);
--
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