From 9cafc9de5ad95466e43d27d2253ac7cdfe79dca3 Mon Sep 17 00:00:00 2001
From: Gerardo Tauriello <gerardo.tauriello@unibas.ch>
Date: Wed, 18 Jul 2018 15:20:54 +0200
Subject: [PATCH] Doc update
---
modules/doc/actions.rst | 8 ++++----
1 file changed, 4 insertions(+), 4 deletions(-)
diff --git a/modules/doc/actions.rst b/modules/doc/actions.rst
index fb2f882d8..1d22faf44 100644
--- a/modules/doc/actions.rst
+++ b/modules/doc/actions.rst
@@ -251,8 +251,8 @@ In the example above the output file looks as follows:
{
"result": {
- "": {
- "": {
+ "model.pdb": {
+ "reference.pdb": {
"info": {
"residue_names_consistent": true,
"mapping": {
@@ -350,7 +350,8 @@ calculate eg. QS-score directly:
.. code:: console
- $OST_ROOT/bin/ost compare-structures --model model.pdb --reference reference.pdb --output output_qs.json --qs-score --residue-number-alignment
+ $ $OST_ROOT/bin/ost compare-structures --model model.pdb --reference reference.pdb --output output_qs.json --qs-score --residue-number-alignment
+
################################################################################
Reading input files (fault_tolerant=False)
--> reading model from model.pdb
@@ -359,7 +360,6 @@ calculate eg. QS-score directly:
imported 3 chains, 408 residues, 3011 atoms; with 0 helices and 0 strands
################################################################################
Comparing model.pdb to reference.pdb
- Chains removed from reference.pdb: _
Chains in reference.pdb: AB
Chains in model.pdb: AB
Chemically equivalent chain-groups in reference.pdb: [['B', 'A']]
--
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