From a5acf2d3939fe1a27b158b91b300dc9bdb9d78ed Mon Sep 17 00:00:00 2001
From: Gerardo Tauriello <gerardo.tauriello@unibas.ch>
Date: Tue, 14 May 2019 14:53:33 +0200
Subject: [PATCH] Fix exception message.
---
modules/seq/alg/src/merge_pairwise_alignments.cc | 10 +++++-----
1 file changed, 5 insertions(+), 5 deletions(-)
diff --git a/modules/seq/alg/src/merge_pairwise_alignments.cc b/modules/seq/alg/src/merge_pairwise_alignments.cc
index c522869cf..aa90c1359 100644
--- a/modules/seq/alg/src/merge_pairwise_alignments.cc
+++ b/modules/seq/alg/src/merge_pairwise_alignments.cc
@@ -143,11 +143,11 @@ AlignmentHandle MergePairwiseAlignments(const AlignmentList& pairwise_alns,
AlignmentHandle ali_handle=*i;
ConstSequenceHandle seq_handle=ali_handle.GetSequence(0);
if (seq_handle.GetOffset()!=ref_offset) {
- String error_string;
- std::ostringstream error_ss(error_string);
- error_ss << "The offset of the first sequence in alignment " << alignment_counter <<
- "is not identical to the offset of the reference sequence." << std::endl;
- throw IntegrityError(error_string);
+ std::ostringstream error_ss;
+ error_ss << "The offset of the first sequence in alignment "
+ << alignment_counter
+ << " is not identical to the offset of the reference sequence.";
+ throw IntegrityError(error_ss.str());
}
alignment_counter+=1;
}
--
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