From b1be936d186d03fb0d6d42df3c2df5b8876d0ef7 Mon Sep 17 00:00:00 2001
From: Andrew Waterhouse <andrew.waterhouse@unibas.ch>
Date: Thu, 5 Jan 2023 10:14:36 +0100
Subject: [PATCH] dont remove non standard res

---
 modules/mol/alg/pymod/scoring.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/modules/mol/alg/pymod/scoring.py b/modules/mol/alg/pymod/scoring.py
index 66dccf754..359aa0e67 100644
--- a/modules/mol/alg/pymod/scoring.py
+++ b/modules/mol/alg/pymod/scoring.py
@@ -172,7 +172,7 @@ class Scorer:
 
         if molck_settings is None:
             molck_settings = MolckSettings(rm_unk_atoms=True,
-                                           rm_non_std=True,
+                                           rm_non_std=False,
                                            rm_hyd_atoms=True,
                                            rm_oxt_atoms=True,
                                            rm_zero_occ_atoms=False,
-- 
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