From b3a9897d2989ebb2a9a89f500161cfccfd9c6172 Mon Sep 17 00:00:00 2001
From: Xavier Robin <xavier.robin@unibas.ch>
Date: Tue, 10 Nov 2020 15:29:52 +0100
Subject: [PATCH] fix: cleanup temp file also in case DSSP failed.
---
modules/bindings/pymod/dssp.py | 1 +
1 file changed, 1 insertion(+)
diff --git a/modules/bindings/pymod/dssp.py b/modules/bindings/pymod/dssp.py
index a31a6cebe..d52b49412 100644
--- a/modules/bindings/pymod/dssp.py
+++ b/modules/bindings/pymod/dssp.py
@@ -110,6 +110,7 @@ def AssignDSSP(ent, pdb_path="", extract_burial_status=False, tmp_dir=None,
# are handled in the parser LoadDSSP)
temp_dssp_path=_ExecuteDSSP(pdb_path, dssp_bin)
if not os.path.exists(temp_dssp_path):
+ _Cleanup(pdb_path, temp_dssp_path, entity_saved)
raise RuntimeError('DSSP output file does not exist.')
# assign DSSP to entity
try:
--
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