From c0581093bedfb32bdd642ff49a9c1ddbad24a287 Mon Sep 17 00:00:00 2001
From: Marco Biasini <marco.biasini@unibas.ch>
Date: Tue, 8 Feb 2011 10:48:51 +0100
Subject: [PATCH] fix some typos found by Alexandra Kos
---
modules/doc/intro-01.rst | 2 +-
modules/mol/base/doc/query.rst | 2 +-
modules/seq/base/doc/seq.rst | 9 +++++----
3 files changed, 7 insertions(+), 6 deletions(-)
diff --git a/modules/doc/intro-01.rst b/modules/doc/intro-01.rst
index 087a80949..cca9e786b 100644
--- a/modules/doc/intro-01.rst
+++ b/modules/doc/intro-01.rst
@@ -24,7 +24,7 @@ To load a PDB file, simply type
fragment=io.LoadPDB('/path/to/examples/code_fragments/entity/fragment.pdb')
This will load the fragment from the specified file 'fragment.pdb' and store the
-result in fragment. The :func:`~ost.io.LoadPDB` has many option, which, for
+result in fragment. The :func:`~ost.io.LoadPDB` has many options, which, for
simplicity will not be discussed here. If you want to know more about the
function, type:
diff --git a/modules/mol/base/doc/query.rst b/modules/mol/base/doc/query.rst
index 42b1cc057..e47085dcb 100644
--- a/modules/mol/base/doc/query.rst
+++ b/modules/mol/base/doc/query.rst
@@ -18,7 +18,7 @@ selections in a convenient way. Selections are carried out mainly by calling the
arginines=model.Select('rname=ARG')
-A simple selection query (called a predicate) consists in a property (here,
+A simple selection query (called a predicate) consists of a property (here,
`rname`), a comparison operator (here, `=`) and an argument (here, `ARG`). The
return value of a call to the :meth:`EntityHandle.Select` method is always an
:class:`EntityView`. The :class:`EntityView` always contains a full hierarchy of
diff --git a/modules/seq/base/doc/seq.rst b/modules/seq/base/doc/seq.rst
index 243ec0d49..ade28f583 100644
--- a/modules/seq/base/doc/seq.rst
+++ b/modules/seq/base/doc/seq.rst
@@ -17,10 +17,11 @@ Attaching Structures to Sequences
--------------------------------------------------------------------------------
-Being a structural biology framework, it is not surprising that the sequence
-classes have been designed to work together with structural data. Each sequence
-can have an attached :class:`~mol.EntityView` allowing for fast mapping between
-residues in the entity view and position in the sequence.
+As OpenStructure is a computational structural biology framework, it is not
+surprising that the sequence classes have been designed to work together with
+structural data. Each sequence can have an attached :class:`~mol.EntityView`
+allowing for fast mapping between residues in the entity view and position in
+the sequence.
.. _sequence-offset:
--
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