From c3cdd734608295eda2a8c21a51395ff1bb882b09 Mon Sep 17 00:00:00 2001
From: Gabriel Studer <gabriel.studer@unibas.ch>
Date: Sun, 30 Aug 2015 15:46:48 +0200
Subject: [PATCH] update documentation

---
 modules/seq/base/doc/seq.rst | 10 ++++++++++
 1 file changed, 10 insertions(+)

diff --git a/modules/seq/base/doc/seq.rst b/modules/seq/base/doc/seq.rst
index 254082fe0..c370c1a40 100644
--- a/modules/seq/base/doc/seq.rst
+++ b/modules/seq/base/doc/seq.rst
@@ -503,6 +503,16 @@ single columns containing amino acid frequencies and transition probabilities.
     :param col:  Column to add
     :type col:  :class:`HMMColumn`
 
+  .. method:: Extract(from,to)
+
+    :param from:  Col Idx to start from
+    :param to:  End Idx, not included in sub-HMM
+
+    :type from:  :class:`int`
+    :type to:  :class:`int`
+
+    :returns:  sub-HMM as defined by given indices
+
   .. attribute:: sequence
 
     Sequence of the columns
-- 
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