diff --git a/modules/mol/base/src/editor_base.cc b/modules/mol/base/src/editor_base.cc index 2b9a3b56d793b24a1cd55d8a92b8872edb66688e..31642fee31bff6b7e4f621bd0376f75647891015 100644 --- a/modules/mol/base/src/editor_base.cc +++ b/modules/mol/base/src/editor_base.cc @@ -208,9 +208,9 @@ void EditorBase::RenumberAllResidues(int start, bool keep_spacing) ent_.Impl()->RenumberAllResidues(start, keep_spacing); } -void EditorBase::RenumberChain(ChainHandle& chain, int start, bool keep_spacing) +void EditorBase::RenumberChain(const String& name, int start, bool keep_spacing) { - chain.Impl()->RenumberAllResidues(start, keep_spacing); + ent_.Impl()->RenumberChain(name, start, keep_spacing); } void EditorBase::RenameAtom(AtomHandle atom, const String& new_name) diff --git a/modules/mol/base/src/editor_base.hh b/modules/mol/base/src/editor_base.hh index c081ab97867d0b98d7aae7b7bb9b83b7888cfbec..3547f22fa4ca54dc170910f1d1ddf09ff6f59640 100644 --- a/modules/mol/base/src/editor_base.hh +++ b/modules/mol/base/src/editor_base.hh @@ -293,7 +293,7 @@ public: /// \param keep_spacing /// If set to false, residues will continously be renumbered ongoing from start. /// Otherwise the spacings between the residues are kept. - void RenumberChain(ChainHandle& chain, int start, bool keep_spacing); + void RenumberChain(const String& name, int start, bool keep_spacing); /// \brief Get edit mode of editor EditMode GetMode() const {return mode_;} diff --git a/modules/mol/base/src/impl/entity_impl.cc b/modules/mol/base/src/impl/entity_impl.cc index 1fd465f235f4d05f7d29d727b4b423dc6a69d277..f8fa19e32b363590ccb7b10d536e1c72f3a3eba2 100644 --- a/modules/mol/base/src/impl/entity_impl.cc +++ b/modules/mol/base/src/impl/entity_impl.cc @@ -1202,4 +1202,16 @@ void EntityImpl::RenumberAllResidues(int start, bool keep_spacing) } +void EntityImpl::RenumberChain(const String& name, int start, bool keep_spacing) +{ + ChainImplPtr ch=this->FindChain(name); + + if(!ch) { + throw Error("Could not find chain with name "+name); + } + + ch->RenumberAllResidues(start, keep_spacing); + +} + }}} // ns diff --git a/modules/mol/base/src/impl/entity_impl.hh b/modules/mol/base/src/impl/entity_impl.hh index c95bef408db5c911b40b71b6ae460baa5890b827..74d8ded333567b09e2b9da6c5843c57a646c6884 100644 --- a/modules/mol/base/src/impl/entity_impl.hh +++ b/modules/mol/base/src/impl/entity_impl.hh @@ -251,6 +251,8 @@ public: void RenumberAllResidues(int start, bool keep_spacing); + void RenumberChain(const String& name, int start, bool keep_spacing); + private: void DoCopy(EntityImplPtr dest);