From c914239e25b710c4606a6a1e2a10f94907e58d34 Mon Sep 17 00:00:00 2001
From: Valerio Mariani <valerio.mariani@unibas.ch>
Date: Fri, 7 Jun 2013 17:40:59 +0200
Subject: [PATCH] Support for TGZ packages with UBUNTU_LAYOUT
Horrible hack (execute_process) to work around the fact that the python modules in Ubuntu are now spread over many directories and symlinked everywhere
---
cmake_support/CopyDependencies.cmake | 47 ++++++++++++++++++----------
cmake_support/OST.cmake | 2 +-
deployment/linux/CMakeLists.txt | 5 ++-
3 files changed, 36 insertions(+), 18 deletions(-)
diff --git a/cmake_support/CopyDependencies.cmake b/cmake_support/CopyDependencies.cmake
index 60f399430..88d88fcc1 100644
--- a/cmake_support/CopyDependencies.cmake
+++ b/cmake_support/CopyDependencies.cmake
@@ -450,7 +450,7 @@ endfunction(copy_python)
# function read_config
#=============================================================================
function(read_config ost_config_var)
- file(READ "${CMAKE_INSTALL_PREFIX}/libexec/openstructure/ost_config" ost_config)
+ file(READ "${CMAKE_INSTALL_PREFIX}/${LIBEXEC_PATH}/ost_config" ost_config)
set(${ost_config_var} "${ost_config}" PARENT_SCOPE)
endfunction(read_config)
@@ -458,7 +458,7 @@ endfunction(read_config)
# function write_config
#=============================================================================
function(write_config ost_config)
- file(WRITE "${CMAKE_INSTALL_PREFIX}/libexec/openstructure/ost_config" "${ost_config}")
+ file(WRITE "${CMAKE_INSTALL_PREFIX}/${LIBEXEC_PATH}/ost_config" "${ost_config}")
endfunction(write_config)
#=============================================================================
@@ -626,13 +626,13 @@ endfunction(get_rpath)
#=============================================================================
function(copy_qt library_dir plugin_dir plugins)
file(COPY "${library_dir}/Resources/qt_menu.nib"
- DESTINATION "${CMAKE_INSTALL_PREFIX}/libexec/openstructure/"
+ DESTINATION "${CMAKE_INSTALL_PREFIX}/${LIBEXEC_PATH}/"
FILE_PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_READ GROUP_EXECUTE WORLD_READ WORLD_EXECUTE)
file(COPY ${plugin_dir}
- DESTINATION ${CMAKE_INSTALL_PREFIX}/libexec/openstructure)
- file(GLOB_RECURSE QT_PLUGINS "${CMAKE_INSTALL_PREFIX}/libexec/openstructure/*.dylib")
+ DESTINATION ${CMAKE_INSTALL_PREFIX}/${LIBEXEC_PATH})
+ file(GLOB_RECURSE QT_PLUGINS "${CMAKE_INSTALL_PREFIX}/${LIBEXEC_PATH}/*.dylib")
set(${plugins} ${QT_PLUGINS} PARENT_SCOPE)
- file(WRITE "${CMAKE_INSTALL_PREFIX}/libexec/openstructure/qt.conf" "[Paths]\nPlugins=../plugins\n")
+ file(WRITE "${CMAKE_INSTALL_PREFIX}/${LIBEXEC_PATH}/qt.conf" "[Paths]\nPlugins=../plugins\n")
endfunction(copy_qt)
#=============================================================================
@@ -819,10 +819,10 @@ endfunction(copy_python)
#=============================================================================
function(copy_qt library_dir plugin_dir plugins)
file(COPY ${plugin_dir}
- DESTINATION ${CMAKE_INSTALL_PREFIX}/libexec/openstructure)
- file(GLOB_RECURSE QT_PLUGINS "${CMAKE_INSTALL_PREFIX}/libexec/openstructure/*.dll")
+ DESTINATION ${CMAKE_INSTALL_PREFIX}/${LIBEXEC_PATH})
+ file(GLOB_RECURSE QT_PLUGINS "${CMAKE_INSTALL_PREFIX}/${LIBEXEC_PATH}-/*.dll")
set(${plugins} ${QT_PLUGINS} PARENT_SCOPE)
- file(WRITE "${CMAKE_INSTALL_PREFIX}/libexec/openstructure/qt.conf" "[Paths]\nPlugins=../plugins\n")
+ file(WRITE "${CMAKE_INSTALL_PREFIX}/${LIBEXEC_PATH}/qt.conf" "[Paths]\nPlugins=../plugins\n")
endfunction(copy_qt)
@@ -916,13 +916,13 @@ endfunction(get_rpath)
#=============================================================================
function(copy_qt library_dir plugin_dir plugins)
file(COPY ${plugin_dir}
- DESTINATION ${CMAKE_INSTALL_PREFIX}/libexec/openstructure)
- file(GLOB_RECURSE QT_PLUGINS "${CMAKE_INSTALL_PREFIX}/libexec/openstructure/*.so")
+ DESTINATION ${CMAKE_INSTALL_PREFIX}/${LIBEXEC_PATH})
+ file(GLOB_RECURSE QT_PLUGINS "${CMAKE_INSTALL_PREFIX}/${LIBEXEC_PATH}/*.so")
foreach(plugin ${QT_PLUGINS})
remove_rpath("${plugin}")
endforeach(plugin)
set(${plugins} ${QT_PLUGINS} PARENT_SCOPE)
- file(WRITE "${CMAKE_INSTALL_PREFIX}/libexec/openstructure/qt.conf" "[Paths]\nPlugins=../plugins\n")
+ file(WRITE "${CMAKE_INSTALL_PREFIX}/${LIBEXEC_PATH}/qt.conf" "[Paths]\nPlugins=../plugins\n")
endfunction(copy_qt)
#=============================================================================
@@ -971,11 +971,22 @@ endfunction(copy_resolved_item)
# function copy_python (Linux)
#=============================================================================
function(copy_python include_path version new_binary_path)
-
-
+ if (_UBUNTU_LAYOUT)
+ if ("${ARCH}" MATCHES "64")
+ set(UBUNTU_ARCH_STRING "x86_64")
+ else()
+ set(UBUNTU_ARCH_STRING "i386")
+ endif()
+ endif()
get_filename_component(real_python_include_path ${include_path} REALPATH)
get_filename_component(python_root_dir ${real_python_include_path}/../.. REALPATH)
- file(COPY ${python_root_dir}/${LIB_DIR}/python${version}/ DESTINATION ${CMAKE_INSTALL_PREFIX}/${LIB_DIR}/python${version})
+ if (_UBUNTU_LAYOUT)
+ execute_process(COMMAND cp -rL ${python_root_dir}/${LIB_DIR}/python${version} ${CMAKE_INSTALL_PREFIX}/${LIB_DIR}/)
+ message("Output: ${out}")
+ message("Error: ${error}")
+ else()
+ file(COPY ${python_root_dir}/${LIB_DIR}/python${version}/ DESTINATION ${CMAKE_INSTALL_PREFIX}/${LIB_DIR}/python${version} PATTERN "*.pyc" EXCLUDE)
+ endif()
file(GLOB py_config_files "${include_path}/pyconfig*.h")
file(COPY ${py_config_files} DESTINATION ${CMAKE_INSTALL_PREFIX}/include/python${version})
file(GLOB_RECURSE python_so_files "${CMAKE_INSTALL_PREFIX}/${LIB_DIR}/python${version}/*.so")
@@ -983,7 +994,11 @@ function(copy_python include_path version new_binary_path)
file(RPATH_REMOVE FILE "${so_file}")
endforeach(so_file)
read_config(ost_config)
- file(GLOB python_libs "${python_root_dir}/${LIB_DIR}/libpython${version}.so*")
+ if (_UBUNTU_LAYOUT)
+ file(GLOB python_libs "${python_root_dir}/${LIB_DIR}/python${version}/config-${UBUNTU_ARCH_STRING}-linux-gnu/libpython${version}.so.*" FOLLOW_SYMLINKS)
+ else()
+ file(GLOB python_libs "${python_root_dir}/${LIB_DIR}/libpython${version}.so*")
+ endif()
file(COPY ${python_libs} DESTINATION ${CMAKE_INSTALL_PREFIX}/${LIB_DIR})
file(COPY ${python_root_dir}/bin/python${version} DESTINATION ${CMAKE_INSTALL_PREFIX}/bin)
set(${new_binary_path} "${CMAKE_INSTALL_PREFIX}/bin/python${version}" PARENT_SCOPE)
diff --git a/cmake_support/OST.cmake b/cmake_support/OST.cmake
index 3c98c78cd..27b9a5eb4 100644
--- a/cmake_support/OST.cmake
+++ b/cmake_support/OST.cmake
@@ -839,7 +839,7 @@ macro(setup_stage)
if (_UBUNTU_LAYOUT)
set(LIBEXEC_PATH ${LIB_DIR}/openstructure/libexec )
set(LIBEXEC_STAGE_PATH ${LIB_STAGE_PATH}/openstructure/libexec )
- else()
+ else()
set(LIBEXEC_PATH libexec/openstructure )
set(LIBEXEC_STAGE_PATH ${STAGE_DIR}/libexec/openstructure )
endif()
diff --git a/deployment/linux/CMakeLists.txt b/deployment/linux/CMakeLists.txt
index 191fecd1d..e4827b011 100644
--- a/deployment/linux/CMakeLists.txt
+++ b/deployment/linux/CMakeLists.txt
@@ -25,6 +25,9 @@ elseif(CPACK_GENERATOR MATCHES "TGZ")
install(CODE "
if(NOT ${CMAKE_INSTALL_PREFIX} MATCHES \${CMAKE_INSTALL_PREFIX})
set(LIB_DIR ${LIB_DIR})#pass libdir variable in install code block
+ set(LIBEXEC_PATH ${LIBEXEC_PATH})#pass libexec_path variable in install code block
+ set(_UBUNTU_LAYOUT ${_UBUNTU_LAYOUT})#pass ubuntu_layout variable in install code block
+ set(ARCH ${ARCH})#pass arch variable in install code block
if(NOT ${_USE_RPATH} STREQUAL ON)
message(\"======================================================================\")
message(\"| Warning, no rpaths will be embedded upon install. |\")
@@ -37,7 +40,7 @@ elseif(CPACK_GENERATOR MATCHES "TGZ")
set(OST_BINARIES \"\${CMAKE_INSTALL_PREFIX}/bin/lddt\"
\"\${CMAKE_INSTALL_PREFIX}/bin/chemdict_tool\"
\"\${CMAKE_INSTALL_PREFIX}/bin/molck\"
- \"\${CMAKE_INSTALL_PREFIX}/libexec/openstructure/gosty\")
+ \"\${CMAKE_INSTALL_PREFIX}/${LIBEXEC_PATH}/gosty\")
copy_python(${PYTHON_INCLUDE_PATH} ${PYTHON_VERSION} new_python_binary)
list(APPEND OST_BINARIES \${new_python_binary})
--
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